Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.26■□□□□ 0.35
NUBP1P53384 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUBP1P53384 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUBP1P53384 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.26■□□□□ 0.35
NUBP1P53384 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
NUBP1P53384 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUBP1P53384 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
NUBP1P53384 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NUBP1P53384 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NUBP1P53384 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.26■□□□□ 0.35
NUBP1P53384 BX005214.2-201ENST00000423499 1077 ntTSL 5 BASIC17.26■□□□□ 0.35
NUBP1P53384 TSSK5P-201ENST00000423978 907 ntBASIC17.26■□□□□ 0.35
NUBP1P53384 MTCYBP32-201ENST00000427945 1084 ntBASIC17.26■□□□□ 0.35
NUBP1P53384 TPTE2P1-204ENST00000435256 593 ntBASIC17.26■□□□□ 0.35
NUBP1P53384 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.26■□□□□ 0.35
NUBP1P53384 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.26■□□□□ 0.35
NUBP1P53384 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NUBP1P53384 TMEM92-AS1-201ENST00000508851 750 ntTSL 3 BASIC17.26■□□□□ 0.35
NUBP1P53384 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.26■□□□□ 0.35
NUBP1P53384 AC027369.6-201ENST00000525520 931 ntBASIC17.26■□□□□ 0.35
NUBP1P53384 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NUBP1P53384 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.26■□□□□ 0.35
NUBP1P53384 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.26■□□□□ 0.35
NUBP1P53384 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.26■□□□□ 0.35
NUBP1P53384 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC17.26■□□□□ 0.35
NUBP1P53384 AC010336.2-201ENST00000564226 506 ntBASIC17.26■□□□□ 0.35
NUBP1P53384 RN7SL819P-201ENST00000581896 270 ntBASIC17.26■□□□□ 0.35
NUBP1P53384 AL132655.2-201ENST00000596276 594 ntBASIC17.26■□□□□ 0.35
NUBP1P53384 AC092574.1-201ENST00000609771 420 ntBASIC17.26■□□□□ 0.35
NUBP1P53384 AL162574.2-201ENST00000614618 657 ntBASIC17.26■□□□□ 0.35
NUBP1P53384 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.26■□□□□ 0.35
NUBP1P53384 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUBP1P53384 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NUBP1P53384 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.26■□□□□ 0.35
NUBP1P53384 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUBP1P53384 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
NUBP1P53384 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUBP1P53384 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NUBP1P53384 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.26■□□□□ 0.35
NUBP1P53384 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.26■□□□□ 0.35
NUBP1P53384 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NUBP1P53384 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NUBP1P53384 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NUBP1P53384 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUBP1P53384 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUBP1P53384 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.25■□□□□ 0.35
NUBP1P53384 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUBP1P53384 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NUBP1P53384 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUBP1P53384 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NUBP1P53384 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUBP1P53384 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUBP1P53384 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NUBP1P53384 MIR1909-201ENST00000411312 80 ntBASIC17.25■□□□□ 0.35
NUBP1P53384 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC17.25■□□□□ 0.35
NUBP1P53384 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC17.25■□□□□ 0.35
NUBP1P53384 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.25■□□□□ 0.35
NUBP1P53384 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC17.25■□□□□ 0.35
NUBP1P53384 RPS3AP29-201ENST00000437728 769 ntBASIC17.25■□□□□ 0.35
NUBP1P53384 ACA64.2-201ENST00000459014 129 ntBASIC17.25■□□□□ 0.35
NUBP1P53384 IL12A-205ENST00000480787 863 ntTSL 3 BASIC17.25■□□□□ 0.35
NUBP1P53384 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NUBP1P53384 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC17.25■□□□□ 0.35
NUBP1P53384 AC022616.2-201ENST00000523185 300 ntBASIC17.25■□□□□ 0.35
NUBP1P53384 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.25■□□□□ 0.35
NUBP1P53384 AC140912.1-201ENST00000577171 1054 ntBASIC17.25■□□□□ 0.35
NUBP1P53384 MIR4515-201ENST00000584082 81 ntBASIC17.25■□□□□ 0.35
NUBP1P53384 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.25■□□□□ 0.35
NUBP1P53384 AL158050.2-201ENST00000605336 568 ntBASIC17.25■□□□□ 0.35
NUBP1P53384 AC116407.2-201ENST00000613639 860 ntBASIC17.25■□□□□ 0.35
NUBP1P53384 AL162390.1-201ENST00000622201 1246 ntBASIC17.25■□□□□ 0.35
NUBP1P53384 CU638689.4-208ENST00000623324 936 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NUBP1P53384 CU634019.6-203ENST00000624728 936 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NUBP1P53384 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.25■□□□□ 0.35
NUBP1P53384 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUBP1P53384 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NUBP1P53384 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
NUBP1P53384 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUBP1P53384 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.25■□□□□ 0.35
NUBP1P53384 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUBP1P53384 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.25■□□□□ 0.35
NUBP1P53384 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
NUBP1P53384 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUBP1P53384 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUBP1P53384 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.25■□□□□ 0.35
NUBP1P53384 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUBP1P53384 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
NUBP1P53384 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUBP1P53384 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUBP1P53384 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUBP1P53384 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUBP1P53384 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NUBP1P53384 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NUBP1P53384 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUBP1P53384 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUBP1P53384 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUBP1P53384 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.24■□□□□ 0.35
NUBP1P53384 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.24■□□□□ 0.35
NUBP1P53384 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUBP1P53384 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms