Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CENPAP49450 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CENPAP49450 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPAP49450 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.81■□□□□ 0.12
CENPAP49450 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.81■□□□□ 0.12
CENPAP49450 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.81■□□□□ 0.12
CENPAP49450 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CENPAP49450 AC097493.4-201ENST00000641197 219 ntBASIC15.81■□□□□ 0.12
CENPAP49450 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPAP49450 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CENPAP49450 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CENPAP49450 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CENPAP49450 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CENPAP49450 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.81■□□□□ 0.12
CENPAP49450 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPAP49450 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.8■□□□□ 0.12
CENPAP49450 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CENPAP49450 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.8■□□□□ 0.12
CENPAP49450 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CENPAP49450 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.8■□□□□ 0.12
CENPAP49450 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 AC016396.2-201ENST00000562575 1417 ntBASIC15.8■□□□□ 0.12
CENPAP49450 KRT8P47-201ENST00000604727 1398 ntBASIC15.8■□□□□ 0.12
CENPAP49450 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.8■□□□□ 0.12
CENPAP49450 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CENPAP49450 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
CENPAP49450 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
CENPAP49450 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CENPAP49450 HLA-F-220ENST00000434407 884 ntBASIC15.8■□□□□ 0.12
CENPAP49450 AC112698.1-201ENST00000510299 916 ntBASIC15.8■□□□□ 0.12
CENPAP49450 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.8■□□□□ 0.12
CENPAP49450 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.8■□□□□ 0.12
CENPAP49450 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.8■□□□□ 0.12
CENPAP49450 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.8■□□□□ 0.12
CENPAP49450 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.8■□□□□ 0.12
CENPAP49450 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CENPAP49450 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
CENPAP49450 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CENPAP49450 CROCCP2-202ENST00000412962 2773 ntBASIC15.8■□□□□ 0.12
CENPAP49450 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.8■□□□□ 0.12
CENPAP49450 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CENPAP49450 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CENPAP49450 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CENPAP49450 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.79■□□□□ 0.12
CENPAP49450 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CENPAP49450 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CENPAP49450 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CENPAP49450 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CENPAP49450 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CENPAP49450 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CENPAP49450 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CENPAP49450 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CENPAP49450 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CENPAP49450 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CENPAP49450 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CENPAP49450 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CENPAP49450 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CENPAP49450 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CENPAP49450 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CENPAP49450 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CENPAP49450 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.79■□□□□ 0.12
CENPAP49450 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.79■□□□□ 0.12
CENPAP49450 AC112907.2-201ENST00000448639 330 ntBASIC15.79■□□□□ 0.12
CENPAP49450 HOMER2P1-201ENST00000455653 964 ntBASIC15.79■□□□□ 0.12
CENPAP49450 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CENPAP49450 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.79■□□□□ 0.12
CENPAP49450 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.79■□□□□ 0.12
CENPAP49450 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CENPAP49450 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.79■□□□□ 0.12
CENPAP49450 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.79■□□□□ 0.12
CENPAP49450 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.79■□□□□ 0.12
CENPAP49450 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.79■□□□□ 0.12
CENPAP49450 AC080080.1-201ENST00000625121 2420 ntBASIC15.79■□□□□ 0.12
CENPAP49450 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CENPAP49450 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms