Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AL162727.3-201ENST00000635661 2787 ntBASIC18.11■□□□□ 0.49
MMP13P45452 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP13P45452 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP13P45452 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP13P45452 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.11■□□□□ 0.49
MMP13P45452 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP13P45452 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MMP13P45452 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP13P45452 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.1■□□□□ 0.49
MMP13P45452 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.1■□□□□ 0.49
MMP13P45452 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP13P45452 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
MMP13P45452 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
MMP13P45452 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP13P45452 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP13P45452 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.1■□□□□ 0.49
MMP13P45452 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.1■□□□□ 0.49
MMP13P45452 HLA-J-201ENST00000462773 1622 ntBASIC18.1■□□□□ 0.49
MMP13P45452 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP13P45452 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.1■□□□□ 0.49
MMP13P45452 AC125634.1-201ENST00000438758 1403 ntBASIC18.1■□□□□ 0.49
MMP13P45452 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.1■□□□□ 0.49
MMP13P45452 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP13P45452 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.1■□□□□ 0.49
MMP13P45452 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP13P45452 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP13P45452 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP13P45452 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
MMP13P45452 AC096633.1-201ENST00000422446 749 ntBASIC18.1■□□□□ 0.49
MMP13P45452 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.1■□□□□ 0.49
MMP13P45452 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
MMP13P45452 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
MMP13P45452 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP13P45452 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP13P45452 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.1■□□□□ 0.49
MMP13P45452 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP13P45452 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP13P45452 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP13P45452 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP13P45452 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.09■□□□□ 0.49
MMP13P45452 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
MMP13P45452 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.09■□□□□ 0.49
MMP13P45452 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
MMP13P45452 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP13P45452 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.09■□□□□ 0.49
MMP13P45452 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.09■□□□□ 0.49
MMP13P45452 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP13P45452 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP13P45452 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP13P45452 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
MMP13P45452 AC097374.2-201ENST00000618617 1306 ntBASIC18.09■□□□□ 0.49
MMP13P45452 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP13P45452 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP13P45452 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP13P45452 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP13P45452 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP13P45452 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
MMP13P45452 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.09■□□□□ 0.49
MMP13P45452 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.09■□□□□ 0.49
MMP13P45452 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.09■□□□□ 0.49
MMP13P45452 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
MMP13P45452 AL138831.2-201ENST00000606564 490 ntBASIC18.09■□□□□ 0.49
MMP13P45452 LINC01451-201ENST00000623792 534 ntBASIC18.09■□□□□ 0.49
MMP13P45452 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.09■□□□□ 0.49
MMP13P45452 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.09■□□□□ 0.49
MMP13P45452 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
MMP13P45452 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP13P45452 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP13P45452 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP13P45452 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP13P45452 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP13P45452 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP13P45452 DOC2GP-204ENST00000639052 2548 ntBASIC18.09■□□□□ 0.49
MMP13P45452 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP13P45452 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP13P45452 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.09■□□□□ 0.49
MMP13P45452 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MMP13P45452 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MMP13P45452 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.08■□□□□ 0.49
MMP13P45452 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
MMP13P45452 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MMP13P45452 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
MMP13P45452 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MMP13P45452 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
MMP13P45452 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MMP13P45452 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
MMP13P45452 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
MMP13P45452 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
MMP13P45452 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
MMP13P45452 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MMP13P45452 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MMP13P45452 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
MMP13P45452 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MMP13P45452 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
MMP13P45452 KRT17P6-201ENST00000453795 1220 ntBASIC18.08■□□□□ 0.48
MMP13P45452 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MMP13P45452 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.08■□□□□ 0.48
MMP13P45452 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.08■□□□□ 0.48
MMP13P45452 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.08■□□□□ 0.48
MMP13P45452 AP000867.3-201ENST00000524675 377 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms