Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.14■□□□□ 0.49
MTHFRP42898 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTHFRP42898 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.14■□□□□ 0.49
MTHFRP42898 MYCLP1-201ENST00000372451 1075 ntBASIC18.14■□□□□ 0.49
MTHFRP42898 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTHFRP42898 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.14■□□□□ 0.49
MTHFRP42898 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.14■□□□□ 0.49
MTHFRP42898 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.14■□□□□ 0.49
MTHFRP42898 AC109322.1-201ENST00000524499 1264 ntBASIC18.14■□□□□ 0.49
MTHFRP42898 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTHFRP42898 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MTHFRP42898 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTHFRP42898 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTHFRP42898 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.14■□□□□ 0.49
MTHFRP42898 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.14■□□□□ 0.49
MTHFRP42898 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTHFRP42898 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTHFRP42898 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
MTHFRP42898 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTHFRP42898 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTHFRP42898 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MTHFRP42898 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTHFRP42898 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTHFRP42898 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MTHFRP42898 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.14■□□□□ 0.49
MTHFRP42898 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTHFRP42898 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MTHFRP42898 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.13■□□□□ 0.49
MTHFRP42898 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MTHFRP42898 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.13■□□□□ 0.49
MTHFRP42898 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
MTHFRP42898 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MTHFRP42898 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
MTHFRP42898 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.13■□□□□ 0.49
MTHFRP42898 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
MTHFRP42898 AC126763.1-201ENST00000552015 2118 ntBASIC18.13■□□□□ 0.49
MTHFRP42898 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MTHFRP42898 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MTHFRP42898 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MTHFRP42898 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.13■□□□□ 0.49
MTHFRP42898 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.13■□□□□ 0.49
MTHFRP42898 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.13■□□□□ 0.49
MTHFRP42898 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MTHFRP42898 AC067863.1-201ENST00000494933 530 ntBASIC18.13■□□□□ 0.49
MTHFRP42898 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MTHFRP42898 RNA5SP421-201ENST00000516864 134 ntBASIC18.13■□□□□ 0.49
MTHFRP42898 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.13■□□□□ 0.49
MTHFRP42898 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.13■□□□□ 0.49
MTHFRP42898 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.13■□□□□ 0.49
MTHFRP42898 MIR4745-201ENST00000577608 62 ntBASIC18.13■□□□□ 0.49
MTHFRP42898 AC138761.1-201ENST00000584393 385 ntBASIC18.13■□□□□ 0.49
MTHFRP42898 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.13■□□□□ 0.49
MTHFRP42898 AC005498.2-205ENST00000593218 784 ntBASIC18.13■□□□□ 0.49
MTHFRP42898 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.13■□□□□ 0.49
MTHFRP42898 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.13■□□□□ 0.49
MTHFRP42898 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.13■□□□□ 0.49
MTHFRP42898 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
MTHFRP42898 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
MTHFRP42898 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MTHFRP42898 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.13■□□□□ 0.49
MTHFRP42898 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MTHFRP42898 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MTHFRP42898 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MTHFRP42898 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.12■□□□□ 0.49
MTHFRP42898 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MTHFRP42898 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MTHFRP42898 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MTHFRP42898 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.12■□□□□ 0.49
MTHFRP42898 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MTHFRP42898 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.12■□□□□ 0.49
MTHFRP42898 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MTHFRP42898 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.12■□□□□ 0.49
MTHFRP42898 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MTHFRP42898 FAM185BP-201ENST00000443595 716 ntBASIC18.12■□□□□ 0.49
MTHFRP42898 AC002558.1-201ENST00000488906 803 ntBASIC18.12■□□□□ 0.49
MTHFRP42898 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.12■□□□□ 0.49
MTHFRP42898 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.12■□□□□ 0.49
MTHFRP42898 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.12■□□□□ 0.49
MTHFRP42898 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.12■□□□□ 0.49
MTHFRP42898 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MTHFRP42898 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.12■□□□□ 0.49
MTHFRP42898 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.12■□□□□ 0.49
MTHFRP42898 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.12■□□□□ 0.49
MTHFRP42898 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MTHFRP42898 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.12■□□□□ 0.49
MTHFRP42898 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MTHFRP42898 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
MTHFRP42898 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MTHFRP42898 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
MTHFRP42898 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MTHFRP42898 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MTHFRP42898 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.11■□□□□ 0.49
MTHFRP42898 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MTHFRP42898 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MTHFRP42898 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.11■□□□□ 0.49
MTHFRP42898 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.11■□□□□ 0.49
MTHFRP42898 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MTHFRP42898 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MTHFRP42898 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
MTHFRP42898 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms