Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFC3P40938 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC3P40938 AC068880.1-201ENST00000507289 2297 ntBASIC15.93■□□□□ 0.14
RFC3P40938 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC3P40938 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.93■□□□□ 0.14
RFC3P40938 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC3P40938 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC3P40938 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC3P40938 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.93■□□□□ 0.14
RFC3P40938 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFC3P40938 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC3P40938 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RFC3P40938 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC3P40938 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC3P40938 KRT18P13-201ENST00000400056 1290 ntBASIC15.93■□□□□ 0.14
RFC3P40938 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.93■□□□□ 0.14
RFC3P40938 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.93■□□□□ 0.14
RFC3P40938 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.93■□□□□ 0.14
RFC3P40938 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
RFC3P40938 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
RFC3P40938 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFC3P40938 AC006538.3-201ENST00000612495 578 ntBASIC15.93■□□□□ 0.14
RFC3P40938 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.93■□□□□ 0.14
RFC3P40938 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.93■□□□□ 0.14
RFC3P40938 ABALON-201ENST00000629058 1903 ntBASIC15.93■□□□□ 0.14
RFC3P40938 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC3P40938 AC009053.2-201ENST00000563701 2365 ntBASIC15.93■□□□□ 0.14
RFC3P40938 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
RFC3P40938 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFC3P40938 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC3P40938 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RFC3P40938 FLJ13224-201ENST00000313737 1514 ntBASIC15.93■□□□□ 0.14
RFC3P40938 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFC3P40938 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.93■□□□□ 0.14
RFC3P40938 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC3P40938 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC3P40938 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RFC3P40938 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFC3P40938 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
RFC3P40938 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFC3P40938 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RFC3P40938 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC3P40938 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC3P40938 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFC3P40938 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RFC3P40938 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFC3P40938 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC3P40938 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFC3P40938 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC3P40938 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
RFC3P40938 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC3P40938 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.92■□□□□ 0.14
RFC3P40938 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC3P40938 DDX43P3-201ENST00000441064 443 ntBASIC15.92■□□□□ 0.14
RFC3P40938 IGHV3-52-201ENST00000519770 353 ntBASIC15.92■□□□□ 0.14
RFC3P40938 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFC3P40938 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.92■□□□□ 0.14
RFC3P40938 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.92■□□□□ 0.14
RFC3P40938 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.92■□□□□ 0.14
RFC3P40938 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.92■□□□□ 0.14
RFC3P40938 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC3P40938 AC027601.4-201ENST00000611259 610 ntBASIC15.92■□□□□ 0.14
RFC3P40938 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.92■□□□□ 0.14
RFC3P40938 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RFC3P40938 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC3P40938 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC3P40938 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC3P40938 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC3P40938 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.92■□□□□ 0.14
RFC3P40938 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC3P40938 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFC3P40938 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC3P40938 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFC3P40938 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFC3P40938 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC3P40938 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.91■□□□□ 0.14
RFC3P40938 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.91■□□□□ 0.14
RFC3P40938 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC3P40938 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC3P40938 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RFC3P40938 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFC3P40938 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.91■□□□□ 0.14
RFC3P40938 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFC3P40938 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC3P40938 AC003669.1-201ENST00000334569 611 ntBASIC15.91■□□□□ 0.14
RFC3P40938 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.91■□□□□ 0.14
RFC3P40938 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.91■□□□□ 0.14
RFC3P40938 ELK2BP-201ENST00000415014 1224 ntBASIC15.91■□□□□ 0.14
RFC3P40938 STK19B-204ENST00000512515 211 ntBASIC15.91■□□□□ 0.14
RFC3P40938 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RFC3P40938 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.91■□□□□ 0.14
RFC3P40938 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.91■□□□□ 0.14
RFC3P40938 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.91■□□□□ 0.14
RFC3P40938 AC006557.2-201ENST00000592985 1240 ntBASIC15.91■□□□□ 0.14
RFC3P40938 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.91■□□□□ 0.14
RFC3P40938 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RFC3P40938 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.91■□□□□ 0.14
RFC3P40938 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC3P40938 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC3P40938 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms