Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL15A1P39059 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
COL15A1P39059 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.9■■□□□ 1.1
COL15A1P39059 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL15A1P39059 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL15A1P39059 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.9■■□□□ 1.1
COL15A1P39059 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.9■■□□□ 1.1
COL15A1P39059 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
COL15A1P39059 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.89■■□□□ 1.1
COL15A1P39059 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
COL15A1P39059 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL15A1P39059 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL15A1P39059 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
COL15A1P39059 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL15A1P39059 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL15A1P39059 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.89■■□□□ 1.09
COL15A1P39059 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL15A1P39059 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
COL15A1P39059 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL15A1P39059 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.89■■□□□ 1.09
COL15A1P39059 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL15A1P39059 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL15A1P39059 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.88■■□□□ 1.09
COL15A1P39059 FAM86GP-201ENST00000448322 971 ntBASIC21.88■■□□□ 1.09
COL15A1P39059 SLBP-205ENST00000488267 987 ntTSL 2 BASIC21.88■■□□□ 1.09
COL15A1P39059 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL15A1P39059 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL15A1P39059 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL15A1P39059 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.88■■□□□ 1.09
COL15A1P39059 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL15A1P39059 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
COL15A1P39059 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL15A1P39059 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL15A1P39059 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL15A1P39059 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL15A1P39059 AC002056.1-201ENST00000395613 760 ntBASIC21.87■■□□□ 1.09
COL15A1P39059 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC21.87■■□□□ 1.09
COL15A1P39059 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.87■■□□□ 1.09
COL15A1P39059 COX20P2-201ENST00000452636 358 ntBASIC21.87■■□□□ 1.09
COL15A1P39059 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.87■■□□□ 1.09
COL15A1P39059 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL15A1P39059 AC107918.2-201ENST00000530817 355 ntBASIC21.87■■□□□ 1.09
COL15A1P39059 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
COL15A1P39059 GREM1-201ENST00000560677 623 ntTSL 4 BASIC21.87■■□□□ 1.09
COL15A1P39059 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC21.87■■□□□ 1.09
COL15A1P39059 AC015911.4-201ENST00000588022 1070 ntBASIC21.87■■□□□ 1.09
COL15A1P39059 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.87■■□□□ 1.09
COL15A1P39059 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
COL15A1P39059 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL15A1P39059 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL15A1P39059 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL15A1P39059 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL15A1P39059 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL15A1P39059 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL15A1P39059 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
COL15A1P39059 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
COL15A1P39059 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL15A1P39059 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
COL15A1P39059 PTMS-202ENST00000389462 773 ntTSL 2 BASIC21.87■■□□□ 1.09
COL15A1P39059 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.87■■□□□ 1.09
COL15A1P39059 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC21.87■■□□□ 1.09
COL15A1P39059 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.87■■□□□ 1.09
COL15A1P39059 KRT8P48-201ENST00000515599 1220 ntBASIC21.87■■□□□ 1.09
COL15A1P39059 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.87■■□□□ 1.09
COL15A1P39059 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.87■■□□□ 1.09
COL15A1P39059 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL15A1P39059 AL390955.2-201ENST00000603032 514 ntBASIC21.87■■□□□ 1.09
COL15A1P39059 AC026120.1-201ENST00000611536 926 ntBASIC21.87■■□□□ 1.09
COL15A1P39059 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL15A1P39059 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL15A1P39059 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
COL15A1P39059 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.86■■□□□ 1.09
COL15A1P39059 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
COL15A1P39059 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC21.86■■□□□ 1.09
COL15A1P39059 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL15A1P39059 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL15A1P39059 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL15A1P39059 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.86■■□□□ 1.09
COL15A1P39059 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL15A1P39059 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.86■■□□□ 1.09
COL15A1P39059 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL15A1P39059 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL15A1P39059 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL15A1P39059 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL15A1P39059 AC140658.5-201ENST00000438532 169 ntBASIC21.86■■□□□ 1.09
COL15A1P39059 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL15A1P39059 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.86■■□□□ 1.09
COL15A1P39059 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL15A1P39059 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC21.85■■□□□ 1.09
COL15A1P39059 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL15A1P39059 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.85■■□□□ 1.09
COL15A1P39059 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
COL15A1P39059 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL15A1P39059 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.85■■□□□ 1.09
COL15A1P39059 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.85■■□□□ 1.09
COL15A1P39059 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL15A1P39059 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL15A1P39059 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL15A1P39059 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC21.85■■□□□ 1.09
COL15A1P39059 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms