Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.26■□□□□ 0.99
PDE6BP35913 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDE6BP35913 AL158211.3-201ENST00000607385 239 ntBASIC21.26■□□□□ 0.99
PDE6BP35913 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.26■□□□□ 0.99
PDE6BP35913 AC084121.4-201ENST00000641598 221 ntBASIC21.26■□□□□ 0.99
PDE6BP35913 AF228730.8-201ENST00000642140 221 ntBASIC21.26■□□□□ 0.99
PDE6BP35913 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PDE6BP35913 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PDE6BP35913 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDE6BP35913 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDE6BP35913 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDE6BP35913 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDE6BP35913 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PDE6BP35913 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDE6BP35913 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC21.25■□□□□ 0.99
PDE6BP35913 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDE6BP35913 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.25■□□□□ 0.99
PDE6BP35913 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDE6BP35913 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDE6BP35913 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDE6BP35913 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDE6BP35913 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PDE6BP35913 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDE6BP35913 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDE6BP35913 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC21.25■□□□□ 0.99
PDE6BP35913 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDE6BP35913 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC21.25■□□□□ 0.99
PDE6BP35913 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.25■□□□□ 0.99
PDE6BP35913 HMGA1P7-201ENST00000406908 502 ntBASIC21.25■□□□□ 0.99
PDE6BP35913 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21.25■□□□□ 0.99
PDE6BP35913 SPDYE14P-201ENST00000442619 822 ntBASIC21.25■□□□□ 0.99
PDE6BP35913 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.25■□□□□ 0.99
PDE6BP35913 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDE6BP35913 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC21.25■□□□□ 0.99
PDE6BP35913 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC21.25■□□□□ 0.99
PDE6BP35913 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PDE6BP35913 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.25■□□□□ 0.99
PDE6BP35913 COX11-202ENST00000571584 1108 ntTSL 2 BASIC21.25■□□□□ 0.99
PDE6BP35913 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC21.25■□□□□ 0.99
PDE6BP35913 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDE6BP35913 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDE6BP35913 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.25■□□□□ 0.99
PDE6BP35913 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.25■□□□□ 0.99
PDE6BP35913 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDE6BP35913 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PDE6BP35913 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDE6BP35913 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDE6BP35913 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDE6BP35913 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PDE6BP35913 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDE6BP35913 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.24■□□□□ 0.99
PDE6BP35913 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDE6BP35913 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDE6BP35913 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDE6BP35913 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDE6BP35913 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDE6BP35913 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.24■□□□□ 0.99
PDE6BP35913 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDE6BP35913 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDE6BP35913 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDE6BP35913 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
PDE6BP35913 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.24■□□□□ 0.99
PDE6BP35913 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC21.24■□□□□ 0.99
PDE6BP35913 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDE6BP35913 AL009183.1-201ENST00000603760 355 ntBASIC21.24■□□□□ 0.99
PDE6BP35913 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PDE6BP35913 AL139327.4-201ENST00000612362 153 ntBASIC21.24■□□□□ 0.99
PDE6BP35913 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.24■□□□□ 0.99
PDE6BP35913 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDE6BP35913 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.24■□□□□ 0.99
PDE6BP35913 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.24■□□□□ 0.99
PDE6BP35913 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.24■□□□□ 0.99
PDE6BP35913 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
PDE6BP35913 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDE6BP35913 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDE6BP35913 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDE6BP35913 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.23■□□□□ 0.99
PDE6BP35913 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC21.23■□□□□ 0.99
PDE6BP35913 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDE6BP35913 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
PDE6BP35913 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PDE6BP35913 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDE6BP35913 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDE6BP35913 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.23■□□□□ 0.99
PDE6BP35913 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDE6BP35913 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDE6BP35913 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.23■□□□□ 0.99
PDE6BP35913 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.23■□□□□ 0.99
PDE6BP35913 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC21.23■□□□□ 0.99
PDE6BP35913 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC21.23■□□□□ 0.99
PDE6BP35913 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDE6BP35913 AC005412.3-201ENST00000580309 715 ntBASIC21.23■□□□□ 0.99
PDE6BP35913 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC21.23■□□□□ 0.99
PDE6BP35913 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC21.23■□□□□ 0.99
PDE6BP35913 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDE6BP35913 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDE6BP35913 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDE6BP35913 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDE6BP35913 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDE6BP35913 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms