Protein–RNA interactions for Protein: P28358

HOXD10, Homeobox protein Hox-D10, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10P28358 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.43■□□□□ 0.7
HOXD10P28358 AC005412.3-201ENST00000580309 715 ntBASIC19.43■□□□□ 0.7
HOXD10P28358 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD10P28358 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD10P28358 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD10P28358 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXD10P28358 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXD10P28358 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXD10P28358 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
HOXD10P28358 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HOXD10P28358 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HOXD10P28358 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD10P28358 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HOXD10P28358 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD10P28358 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HOXD10P28358 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXD10P28358 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD10P28358 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD10P28358 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
HOXD10P28358 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD10P28358 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXD10P28358 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD10P28358 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD10P28358 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXD10P28358 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD10P28358 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD10P28358 ATP5G2P4-201ENST00000442175 420 ntBASIC19.42■□□□□ 0.7
HOXD10P28358 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXD10P28358 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXD10P28358 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXD10P28358 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXD10P28358 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.42■□□□□ 0.7
HOXD10P28358 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXD10P28358 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD10P28358 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
HOXD10P28358 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD10P28358 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
HOXD10P28358 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXD10P28358 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD10P28358 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXD10P28358 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXD10P28358 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD10P28358 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD10P28358 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD10P28358 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD10P28358 AC093677.2-201ENST00000600169 1863 ntBASIC19.41■□□□□ 0.7
HOXD10P28358 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HOXD10P28358 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD10P28358 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXD10P28358 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HOXD10P28358 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXD10P28358 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
HOXD10P28358 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD10P28358 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD10P28358 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HOXD10P28358 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD10P28358 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXD10P28358 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXD10P28358 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HOXD10P28358 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXD10P28358 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXD10P28358 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXD10P28358 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXD10P28358 AC109635.5-201ENST00000533593 962 ntBASIC19.41■□□□□ 0.7
HOXD10P28358 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXD10P28358 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXD10P28358 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD10P28358 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD10P28358 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXD10P28358 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HOXD10P28358 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD10P28358 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD10P28358 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD10P28358 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXD10P28358 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXD10P28358 CU639417.3-201ENST00000624240 1404 ntBASIC19.41■□□□□ 0.7
HOXD10P28358 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXD10P28358 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD10P28358 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD10P28358 AC012569.1-201ENST00000591191 1524 ntBASIC19.41■□□□□ 0.7
HOXD10P28358 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD10P28358 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD10P28358 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD10P28358 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD10P28358 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
HOXD10P28358 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD10P28358 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXD10P28358 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD10P28358 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD10P28358 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXD10P28358 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXD10P28358 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXD10P28358 AC027369.6-201ENST00000525520 931 ntBASIC19.4■□□□□ 0.7
HOXD10P28358 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD10P28358 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXD10P28358 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXD10P28358 AC008267.7-201ENST00000624570 1194 ntBASIC19.4■□□□□ 0.7
HOXD10P28358 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD10P28358 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXD10P28358 WASH6P-202ENST00000359512 1437 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms