Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH3P22223 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.08■□□□□ 0.33
CDH3P22223 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CDH3P22223 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.08■□□□□ 0.33
CDH3P22223 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH3P22223 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH3P22223 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH3P22223 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH3P22223 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.08■□□□□ 0.32
CDH3P22223 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.08■□□□□ 0.32
CDH3P22223 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH3P22223 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.08■□□□□ 0.32
CDH3P22223 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
CDH3P22223 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.08■□□□□ 0.32
CDH3P22223 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.08■□□□□ 0.32
CDH3P22223 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH3P22223 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CDH3P22223 AC104692.2-201ENST00000603054 253 ntBASIC17.08■□□□□ 0.32
CDH3P22223 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH3P22223 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CDH3P22223 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH3P22223 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH3P22223 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CDH3P22223 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CDH3P22223 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH3P22223 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH3P22223 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH3P22223 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH3P22223 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.08■□□□□ 0.32
CDH3P22223 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.07■□□□□ 0.32
CDH3P22223 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 AC010460.3-201ENST00000511359 1579 ntBASIC17.07■□□□□ 0.32
CDH3P22223 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH3P22223 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH3P22223 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH3P22223 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.07■□□□□ 0.32
CDH3P22223 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDH3P22223 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
CDH3P22223 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 MTDHP3-201ENST00000594186 672 ntBASIC17.07■□□□□ 0.32
CDH3P22223 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.07■□□□□ 0.32
CDH3P22223 AP001269.4-201ENST00000609611 512 ntBASIC17.07■□□□□ 0.32
CDH3P22223 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.07■□□□□ 0.32
CDH3P22223 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.07■□□□□ 0.32
CDH3P22223 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH3P22223 AC100803.2-201ENST00000562459 1963 ntBASIC17.07■□□□□ 0.32
CDH3P22223 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH3P22223 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDH3P22223 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.07■□□□□ 0.32
CDH3P22223 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.07■□□□□ 0.32
CDH3P22223 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDH3P22223 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH3P22223 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH3P22223 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH3P22223 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CDH3P22223 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH3P22223 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CDH3P22223 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH3P22223 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH3P22223 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH3P22223 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CDH3P22223 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH3P22223 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH3P22223 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH3P22223 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH3P22223 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.06■□□□□ 0.32
CDH3P22223 RBM17P3-201ENST00000417687 1192 ntBASIC17.06■□□□□ 0.32
CDH3P22223 ABCD1P5-201ENST00000445663 754 ntBASIC17.06■□□□□ 0.32
CDH3P22223 AC009078.2-202ENST00000463353 338 ntBASIC17.06■□□□□ 0.32
CDH3P22223 AP002469.2-201ENST00000531724 424 ntBASIC17.06■□□□□ 0.32
CDH3P22223 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.06■□□□□ 0.32
CDH3P22223 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.06■□□□□ 0.32
CDH3P22223 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH3P22223 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CDH3P22223 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH3P22223 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms