Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DPA1P20036 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 SPDYE21P-201ENST00000413323 827 ntBASIC17.54■□□□□ 0.4
HLA-DPA1P20036 TSPY19P-201ENST00000418461 509 ntBASIC17.54■□□□□ 0.4
HLA-DPA1P20036 AL020989.1-201ENST00000422979 469 ntBASIC17.54■□□□□ 0.4
HLA-DPA1P20036 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 TSPY18P-201ENST00000441642 509 ntBASIC17.54■□□□□ 0.4
HLA-DPA1P20036 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 AC132008.2-207ENST00000454517 770 ntBASIC17.54■□□□□ 0.4
HLA-DPA1P20036 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 KRT18P31-201ENST00000506277 1292 ntBASIC17.54■□□□□ 0.4
HLA-DPA1P20036 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 FZD10-202ENST00000539839 3282 ntBASIC17.54■□□□□ 0.4
HLA-DPA1P20036 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 SIGLEC16-201ENST00000599858 1437 ntBASIC17.54■□□□□ 0.4
HLA-DPA1P20036 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DPA1P20036 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.53■□□□□ 0.4
HLA-DPA1P20036 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms