Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.68■□□□□ 0.58
CD58P19256 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CD58P19256 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD58P19256 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CD58P19256 AC148477.5-201ENST00000625164 1645 ntBASIC18.68■□□□□ 0.58
CD58P19256 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD58P19256 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.68■□□□□ 0.58
CD58P19256 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.68■□□□□ 0.58
CD58P19256 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD58P19256 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.68■□□□□ 0.58
CD58P19256 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CD58P19256 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD58P19256 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.68■□□□□ 0.58
CD58P19256 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.68■□□□□ 0.58
CD58P19256 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.68■□□□□ 0.58
CD58P19256 SAPCD2P3-201ENST00000455031 850 ntBASIC18.68■□□□□ 0.58
CD58P19256 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD58P19256 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD58P19256 AF238378.1-201ENST00000526806 358 ntBASIC18.68■□□□□ 0.58
CD58P19256 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.68■□□□□ 0.58
CD58P19256 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CD58P19256 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD58P19256 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CD58P19256 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.68■□□□□ 0.58
CD58P19256 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD58P19256 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.68■□□□□ 0.58
CD58P19256 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CD58P19256 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.68■□□□□ 0.58
CD58P19256 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.68■□□□□ 0.58
CD58P19256 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD58P19256 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CD58P19256 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CD58P19256 AC108860.2-201ENST00000562760 2183 ntBASIC18.68■□□□□ 0.58
CD58P19256 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD58P19256 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD58P19256 AC009336.1-201ENST00000608941 1553 ntBASIC18.68■□□□□ 0.58
CD58P19256 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD58P19256 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.67■□□□□ 0.58
CD58P19256 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD58P19256 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CD58P19256 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.67■□□□□ 0.58
CD58P19256 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD58P19256 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD58P19256 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD58P19256 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD58P19256 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD58P19256 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD58P19256 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD58P19256 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.67■□□□□ 0.58
CD58P19256 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.67■□□□□ 0.58
CD58P19256 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.67■□□□□ 0.58
CD58P19256 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD58P19256 BX005266.1-201ENST00000473402 457 ntBASIC18.67■□□□□ 0.58
CD58P19256 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.67■□□□□ 0.58
CD58P19256 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.67■□□□□ 0.58
CD58P19256 RN7SL510P-201ENST00000581311 263 ntBASIC18.67■□□□□ 0.58
CD58P19256 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.67■□□□□ 0.58
CD58P19256 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.67■□□□□ 0.58
CD58P19256 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD58P19256 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD58P19256 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CD58P19256 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD58P19256 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD58P19256 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD58P19256 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD58P19256 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD58P19256 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD58P19256 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD58P19256 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CD58P19256 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CD58P19256 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD58P19256 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD58P19256 SPDYE21P-201ENST00000413323 827 ntBASIC18.66■□□□□ 0.58
CD58P19256 RBM17P3-201ENST00000417687 1192 ntBASIC18.66■□□□□ 0.58
CD58P19256 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.66■□□□□ 0.58
CD58P19256 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.66■□□□□ 0.58
CD58P19256 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.66■□□□□ 0.58
CD58P19256 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.66■□□□□ 0.58
CD58P19256 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.66■□□□□ 0.58
CD58P19256 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.66■□□□□ 0.58
CD58P19256 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.66■□□□□ 0.58
CD58P19256 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.66■□□□□ 0.58
CD58P19256 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.66■□□□□ 0.58
CD58P19256 AL355877.3-201ENST00000622820 899 ntBASIC18.66■□□□□ 0.58
CD58P19256 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD58P19256 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD58P19256 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CD58P19256 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.66■□□□□ 0.58
CD58P19256 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD58P19256 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD58P19256 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD58P19256 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD58P19256 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CD58P19256 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
CD58P19256 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.66■□□□□ 0.58
CD58P19256 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD58P19256 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.66■□□□□ 0.58
CD58P19256 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CD58P19256 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.66■□□□□ 0.58
CD58P19256 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms