Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ATF1P18846 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ATF1P18846 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATF1P18846 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.29■□□□□ 0.04
ATF1P18846 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.29■□□□□ 0.04
ATF1P18846 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATF1P18846 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
ATF1P18846 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ATF1P18846 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATF1P18846 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATF1P18846 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATF1P18846 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
ATF1P18846 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ATF1P18846 CROCCP1-201ENST00000426910 5675 ntBASIC15.29■□□□□ 0.04
ATF1P18846 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATF1P18846 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.29■□□□□ 0.04
ATF1P18846 AC092171.3-201ENST00000610122 2651 ntBASIC15.29■□□□□ 0.04
ATF1P18846 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATF1P18846 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATF1P18846 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ATF1P18846 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.29■□□□□ 0.04
ATF1P18846 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATF1P18846 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.29■□□□□ 0.04
ATF1P18846 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATF1P18846 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.29■□□□□ 0.04
ATF1P18846 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATF1P18846 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATF1P18846 AC010203.1-204ENST00000548782 407 ntBASIC15.29■□□□□ 0.04
ATF1P18846 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.29■□□□□ 0.04
ATF1P18846 AL441883.1-201ENST00000566170 1045 ntBASIC15.29■□□□□ 0.04
ATF1P18846 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATF1P18846 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATF1P18846 PCDHB17P-201ENST00000539533 2393 ntBASIC15.29■□□□□ 0.04
ATF1P18846 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATF1P18846 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATF1P18846 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.29■□□□□ 0.04
ATF1P18846 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATF1P18846 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATF1P18846 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATF1P18846 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.29■□□□□ 0.04
ATF1P18846 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
ATF1P18846 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATF1P18846 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATF1P18846 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATF1P18846 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.28■□□□□ 0.04
ATF1P18846 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ATF1P18846 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.28■□□□□ 0.04
ATF1P18846 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ATF1P18846 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
ATF1P18846 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATF1P18846 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATF1P18846 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ATF1P18846 LINC01311-201ENST00000565162 1445 ntBASIC15.28■□□□□ 0.04
ATF1P18846 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.28■□□□□ 0.04
ATF1P18846 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATF1P18846 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATF1P18846 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATF1P18846 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATF1P18846 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATF1P18846 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
ATF1P18846 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATF1P18846 HLA-F-220ENST00000434407 884 ntBASIC15.28■□□□□ 0.04
ATF1P18846 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.28■□□□□ 0.04
ATF1P18846 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATF1P18846 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.28■□□□□ 0.04
ATF1P18846 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.28■□□□□ 0.04
ATF1P18846 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.28■□□□□ 0.04
ATF1P18846 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATF1P18846 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATF1P18846 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATF1P18846 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
ATF1P18846 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.28■□□□□ 0.04
ATF1P18846 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATF1P18846 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.28■□□□□ 0.04
ATF1P18846 LINC02012-201ENST00000608206 1725 ntBASIC15.28■□□□□ 0.04
ATF1P18846 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATF1P18846 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATF1P18846 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ATF1P18846 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
ATF1P18846 AC006449.5-201ENST00000610658 2098 ntBASIC15.28■□□□□ 0.04
ATF1P18846 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.27■□□□□ 0.04
ATF1P18846 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.27■□□□□ 0.04
ATF1P18846 AC078925.2-201ENST00000624013 1973 ntBASIC15.27■□□□□ 0.04
ATF1P18846 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATF1P18846 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATF1P18846 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.27■□□□□ 0.04
ATF1P18846 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.27■□□□□ 0.04
ATF1P18846 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.27■□□□□ 0.04
ATF1P18846 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATF1P18846 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATF1P18846 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
ATF1P18846 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.27■□□□□ 0.04
ATF1P18846 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATF1P18846 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.27■□□□□ 0.04
ATF1P18846 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATF1P18846 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATF1P18846 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ATF1P18846 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms