Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SMPD1P17405 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SMPD1P17405 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMPD1P17405 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMPD1P17405 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.2■□□□□ 0.66
SMPD1P17405 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.2■□□□□ 0.66
SMPD1P17405 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMPD1P17405 BCRP1-201ENST00000444246 691 ntBASIC19.2■□□□□ 0.66
SMPD1P17405 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.2■□□□□ 0.66
SMPD1P17405 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.2■□□□□ 0.66
SMPD1P17405 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMPD1P17405 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SMPD1P17405 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.2■□□□□ 0.66
SMPD1P17405 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.2■□□□□ 0.66
SMPD1P17405 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMPD1P17405 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SMPD1P17405 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMPD1P17405 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMPD1P17405 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.2■□□□□ 0.66
SMPD1P17405 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMPD1P17405 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMPD1P17405 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMPD1P17405 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.19■□□□□ 0.66
SMPD1P17405 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMPD1P17405 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMPD1P17405 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMPD1P17405 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMPD1P17405 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.19■□□□□ 0.66
SMPD1P17405 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMPD1P17405 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMPD1P17405 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMPD1P17405 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMPD1P17405 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMPD1P17405 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMPD1P17405 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMPD1P17405 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.19■□□□□ 0.66
SMPD1P17405 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SMPD1P17405 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.19■□□□□ 0.66
SMPD1P17405 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.19■□□□□ 0.66
SMPD1P17405 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.19■□□□□ 0.66
SMPD1P17405 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMPD1P17405 AC009093.7-201ENST00000623853 1223 ntBASIC19.19■□□□□ 0.66
SMPD1P17405 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMPD1P17405 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMPD1P17405 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
SMPD1P17405 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMPD1P17405 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
SMPD1P17405 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SMPD1P17405 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMPD1P17405 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMPD1P17405 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMPD1P17405 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMPD1P17405 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.19■□□□□ 0.66
SMPD1P17405 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.18■□□□□ 0.66
SMPD1P17405 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMPD1P17405 AC012317.2-201ENST00000623305 2251 ntBASIC19.18■□□□□ 0.66
SMPD1P17405 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMPD1P17405 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMPD1P17405 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.18■□□□□ 0.66
SMPD1P17405 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
SMPD1P17405 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
SMPD1P17405 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SMPD1P17405 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SMPD1P17405 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.18■□□□□ 0.66
SMPD1P17405 SPDYE11-202ENST00000450699 704 ntBASIC19.18■□□□□ 0.66
SMPD1P17405 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.18■□□□□ 0.66
SMPD1P17405 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.18■□□□□ 0.66
SMPD1P17405 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.18■□□□□ 0.66
SMPD1P17405 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
SMPD1P17405 FAM86C2P-203ENST00000528684 1004 ntBASIC19.18■□□□□ 0.66
SMPD1P17405 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.18■□□□□ 0.66
SMPD1P17405 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
SMPD1P17405 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.18■□□□□ 0.66
SMPD1P17405 SPDYE9P-201ENST00000570642 692 ntBASIC19.18■□□□□ 0.66
SMPD1P17405 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.18■□□□□ 0.66
SMPD1P17405 MIR4515-201ENST00000584082 81 ntBASIC19.18■□□□□ 0.66
SMPD1P17405 AC005498.2-205ENST00000593218 784 ntBASIC19.18■□□□□ 0.66
SMPD1P17405 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMPD1P17405 AL096865.1-201ENST00000606796 927 ntBASIC19.18■□□□□ 0.66
SMPD1P17405 SPDYE10P-202ENST00000612005 668 ntBASIC19.18■□□□□ 0.66
SMPD1P17405 SPDYE8P-202ENST00000612377 668 ntBASIC19.18■□□□□ 0.66
SMPD1P17405 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMPD1P17405 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMPD1P17405 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.18■□□□□ 0.66
SMPD1P17405 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMPD1P17405 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.18■□□□□ 0.66
SMPD1P17405 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMPD1P17405 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMPD1P17405 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMPD1P17405 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.18■□□□□ 0.66
SMPD1P17405 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMPD1P17405 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.18■□□□□ 0.66
SMPD1P17405 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.18■□□□□ 0.66
SMPD1P17405 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SMPD1P17405 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMPD1P17405 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMPD1P17405 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.17■□□□□ 0.66
SMPD1P17405 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMPD1P17405 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMPD1P17405 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms