Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.26■□□□□ 0.51
PDGFRAP16234 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.26■□□□□ 0.51
PDGFRAP16234 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.26■□□□□ 0.51
PDGFRAP16234 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
PDGFRAP16234 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFRAP16234 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFRAP16234 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.26■□□□□ 0.51
PDGFRAP16234 KLF4P1-201ENST00000412782 1185 ntBASIC18.26■□□□□ 0.51
PDGFRAP16234 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.26■□□□□ 0.51
PDGFRAP16234 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.26■□□□□ 0.51
PDGFRAP16234 ABCD1P5-201ENST00000445663 754 ntBASIC18.26■□□□□ 0.51
PDGFRAP16234 AC132008.2-207ENST00000454517 770 ntBASIC18.26■□□□□ 0.51
PDGFRAP16234 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.26■□□□□ 0.51
PDGFRAP16234 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.26■□□□□ 0.51
PDGFRAP16234 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.26■□□□□ 0.51
PDGFRAP16234 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PDGFRAP16234 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.26■□□□□ 0.51
PDGFRAP16234 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFRAP16234 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PDGFRAP16234 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFRAP16234 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFRAP16234 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.26■□□□□ 0.51
PDGFRAP16234 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFRAP16234 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.26■□□□□ 0.51
PDGFRAP16234 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFRAP16234 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFRAP16234 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFRAP16234 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFRAP16234 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFRAP16234 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PDGFRAP16234 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PDGFRAP16234 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFRAP16234 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFRAP16234 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFRAP16234 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFRAP16234 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.25■□□□□ 0.51
PDGFRAP16234 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
PDGFRAP16234 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFRAP16234 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.25■□□□□ 0.51
PDGFRAP16234 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.25■□□□□ 0.51
PDGFRAP16234 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFRAP16234 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PDGFRAP16234 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFRAP16234 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.25■□□□□ 0.51
PDGFRAP16234 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFRAP16234 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.25■□□□□ 0.51
PDGFRAP16234 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFRAP16234 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFRAP16234 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFRAP16234 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PDGFRAP16234 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
PDGFRAP16234 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.25■□□□□ 0.51
PDGFRAP16234 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFRAP16234 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PDGFRAP16234 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
PDGFRAP16234 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PDGFRAP16234 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFRAP16234 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFRAP16234 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.24■□□□□ 0.51
PDGFRAP16234 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFRAP16234 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.24■□□□□ 0.51
PDGFRAP16234 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFRAP16234 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PDGFRAP16234 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFRAP16234 AKR1C7P-201ENST00000305623 895 ntBASIC18.24■□□□□ 0.51
PDGFRAP16234 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PDGFRAP16234 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PDGFRAP16234 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.24■□□□□ 0.51
PDGFRAP16234 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
PDGFRAP16234 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.24■□□□□ 0.51
PDGFRAP16234 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.24■□□□□ 0.51
PDGFRAP16234 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.24■□□□□ 0.51
PDGFRAP16234 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PDGFRAP16234 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.24■□□□□ 0.51
PDGFRAP16234 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFRAP16234 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.24■□□□□ 0.51
PDGFRAP16234 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFRAP16234 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFRAP16234 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFRAP16234 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
PDGFRAP16234 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFRAP16234 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFRAP16234 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PDGFRAP16234 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFRAP16234 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFRAP16234 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.23■□□□□ 0.51
PDGFRAP16234 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFRAP16234 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFRAP16234 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFRAP16234 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFRAP16234 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PDGFRAP16234 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.23■□□□□ 0.51
PDGFRAP16234 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.23■□□□□ 0.51
PDGFRAP16234 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.23■□□□□ 0.51
PDGFRAP16234 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFRAP16234 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFRAP16234 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.23■□□□□ 0.51
PDGFRAP16234 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFRAP16234 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFRAP16234 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms