Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.32■□□□□ 0.2
CCL4P13236 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.32■□□□□ 0.2
CCL4P13236 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCL4P13236 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL4P13236 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.32■□□□□ 0.2
CCL4P13236 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL4P13236 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.32■□□□□ 0.2
CCL4P13236 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.32■□□□□ 0.2
CCL4P13236 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.32■□□□□ 0.2
CCL4P13236 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL4P13236 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
CCL4P13236 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.32■□□□□ 0.2
CCL4P13236 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.32■□□□□ 0.2
CCL4P13236 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCL4P13236 AL121761.2-201ENST00000598007 1648 ntBASIC16.32■□□□□ 0.2
CCL4P13236 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.32■□□□□ 0.2
CCL4P13236 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
CCL4P13236 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL4P13236 BCL2-203ENST00000589955 5011 ntBASIC16.32■□□□□ 0.2
CCL4P13236 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CCL4P13236 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CCL4P13236 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL4P13236 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL4P13236 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.31■□□□□ 0.2
CCL4P13236 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL4P13236 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCL4P13236 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.31■□□□□ 0.2
CCL4P13236 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.31■□□□□ 0.2
CCL4P13236 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL4P13236 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CCL4P13236 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL4P13236 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.31■□□□□ 0.2
CCL4P13236 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL4P13236 AC129492.6-201ENST00000611383 1305 ntBASIC16.31■□□□□ 0.2
CCL4P13236 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL4P13236 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL4P13236 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL4P13236 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.31■□□□□ 0.2
CCL4P13236 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.31■□□□□ 0.2
CCL4P13236 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL4P13236 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.31■□□□□ 0.2
CCL4P13236 AC112191.1-201ENST00000523689 701 ntBASIC16.31■□□□□ 0.2
CCL4P13236 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.31■□□□□ 0.2
CCL4P13236 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.31■□□□□ 0.2
CCL4P13236 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCL4P13236 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL4P13236 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
CCL4P13236 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.31■□□□□ 0.2
CCL4P13236 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL4P13236 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL4P13236 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL4P13236 ABALON-201ENST00000629058 1903 ntBASIC16.31■□□□□ 0.2
CCL4P13236 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.31■□□□□ 0.2
CCL4P13236 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL4P13236 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCL4P13236 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CCL4P13236 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CCL4P13236 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.3■□□□□ 0.2
CCL4P13236 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCL4P13236 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.3■□□□□ 0.2
CCL4P13236 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.3■□□□□ 0.2
CCL4P13236 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.3■□□□□ 0.2
CCL4P13236 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.3■□□□□ 0.2
CCL4P13236 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.3■□□□□ 0.2
CCL4P13236 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.3■□□□□ 0.2
CCL4P13236 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCL4P13236 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.3■□□□□ 0.2
CCL4P13236 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCL4P13236 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.3■□□□□ 0.2
CCL4P13236 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.3■□□□□ 0.2
CCL4P13236 AC092364.2-202ENST00000597012 1073 ntBASIC16.3■□□□□ 0.2
CCL4P13236 AC093512.1-201ENST00000617969 520 ntBASIC16.3■□□□□ 0.2
CCL4P13236 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.3■□□□□ 0.2
CCL4P13236 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCL4P13236 LINC01451-201ENST00000623792 534 ntBASIC16.3■□□□□ 0.2
CCL4P13236 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.3■□□□□ 0.2
CCL4P13236 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CCL4P13236 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.3■□□□□ 0.2
CCL4P13236 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.3■□□□□ 0.2
CCL4P13236 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.3■□□□□ 0.2
CCL4P13236 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCL4P13236 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms