Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PEPDP12955 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PEPDP12955 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEPDP12955 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PEPDP12955 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PEPDP12955 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.13■□□□□ 0.17
PEPDP12955 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.13■□□□□ 0.17
PEPDP12955 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEPDP12955 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PEPDP12955 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PEPDP12955 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEPDP12955 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PEPDP12955 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PEPDP12955 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEPDP12955 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEPDP12955 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.13■□□□□ 0.17
PEPDP12955 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.13■□□□□ 0.17
PEPDP12955 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.13■□□□□ 0.17
PEPDP12955 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.13■□□□□ 0.17
PEPDP12955 AC009533.2-201ENST00000543664 586 ntBASIC16.13■□□□□ 0.17
PEPDP12955 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.13■□□□□ 0.17
PEPDP12955 AC091304.2-201ENST00000564639 760 ntBASIC16.13■□□□□ 0.17
PEPDP12955 AC116407.2-201ENST00000613639 860 ntBASIC16.13■□□□□ 0.17
PEPDP12955 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.13■□□□□ 0.17
PEPDP12955 AL691432.3-201ENST00000621860 400 ntBASIC16.13■□□□□ 0.17
PEPDP12955 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEPDP12955 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.13■□□□□ 0.17
PEPDP12955 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.13■□□□□ 0.17
PEPDP12955 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PEPDP12955 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PEPDP12955 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.13■□□□□ 0.17
PEPDP12955 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEPDP12955 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEPDP12955 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEPDP12955 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEPDP12955 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.13■□□□□ 0.17
PEPDP12955 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PEPDP12955 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PEPDP12955 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.12■□□□□ 0.17
PEPDP12955 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PEPDP12955 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.12■□□□□ 0.17
PEPDP12955 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.12■□□□□ 0.17
PEPDP12955 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PEPDP12955 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 TSPY19P-201ENST00000418461 509 ntBASIC16.12■□□□□ 0.17
PEPDP12955 TSPY18P-201ENST00000441642 509 ntBASIC16.12■□□□□ 0.17
PEPDP12955 KRT16P4-201ENST00000453883 522 ntBASIC16.12■□□□□ 0.17
PEPDP12955 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PEPDP12955 AC111152.3-201ENST00000569699 673 ntBASIC16.12■□□□□ 0.17
PEPDP12955 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.12■□□□□ 0.17
PEPDP12955 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.12■□□□□ 0.17
PEPDP12955 AC138894.3-201ENST00000603787 634 ntBASIC16.12■□□□□ 0.17
PEPDP12955 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.12■□□□□ 0.17
PEPDP12955 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PEPDP12955 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.12■□□□□ 0.17
PEPDP12955 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PEPDP12955 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 AC009949.1-201ENST00000623048 1830 ntBASIC16.12■□□□□ 0.17
PEPDP12955 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PEPDP12955 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PEPDP12955 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEPDP12955 AC080080.1-201ENST00000625121 2420 ntBASIC16.11■□□□□ 0.17
PEPDP12955 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.11■□□□□ 0.17
PEPDP12955 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEPDP12955 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEPDP12955 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PEPDP12955 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.11■□□□□ 0.17
PEPDP12955 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
PEPDP12955 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEPDP12955 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PEPDP12955 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEPDP12955 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEPDP12955 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PEPDP12955 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEPDP12955 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEPDP12955 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms