Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL11A1P12107 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.54■□□□□ 0.72
COL11A1P12107 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL11A1P12107 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.54■□□□□ 0.72
COL11A1P12107 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL11A1P12107 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL11A1P12107 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.53■□□□□ 0.72
COL11A1P12107 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL11A1P12107 HMGA1P7-201ENST00000406908 502 ntBASIC19.53■□□□□ 0.72
COL11A1P12107 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.53■□□□□ 0.72
COL11A1P12107 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.53■□□□□ 0.72
COL11A1P12107 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL11A1P12107 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
COL11A1P12107 AC004449.1-201ENST00000564240 433 ntBASIC19.53■□□□□ 0.72
COL11A1P12107 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.53■□□□□ 0.72
COL11A1P12107 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.53■□□□□ 0.72
COL11A1P12107 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.53■□□□□ 0.72
COL11A1P12107 LINC00628-201ENST00000628516 1289 ntBASIC19.53■□□□□ 0.72
COL11A1P12107 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.53■□□□□ 0.72
COL11A1P12107 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL11A1P12107 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
COL11A1P12107 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL11A1P12107 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.53■□□□□ 0.72
COL11A1P12107 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL11A1P12107 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
COL11A1P12107 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.53■□□□□ 0.72
COL11A1P12107 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL11A1P12107 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
COL11A1P12107 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.53■□□□□ 0.72
COL11A1P12107 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL11A1P12107 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL11A1P12107 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
COL11A1P12107 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.53■□□□□ 0.72
COL11A1P12107 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL11A1P12107 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL11A1P12107 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.53■□□□□ 0.72
COL11A1P12107 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.53■□□□□ 0.72
COL11A1P12107 SLC25A6P5-201ENST00000435663 894 ntBASIC19.53■□□□□ 0.72
COL11A1P12107 AC069335.1-201ENST00000489972 472 ntBASIC19.53■□□□□ 0.72
COL11A1P12107 MIR4515-201ENST00000584082 81 ntBASIC19.53■□□□□ 0.72
COL11A1P12107 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
COL11A1P12107 AL031055.1-201ENST00000606362 631 ntBASIC19.53■□□□□ 0.72
COL11A1P12107 AJ011932.1-201ENST00000621707 465 ntBASIC19.53■□□□□ 0.72
COL11A1P12107 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL11A1P12107 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
COL11A1P12107 AL121761.2-201ENST00000598007 1648 ntBASIC19.53■□□□□ 0.72
COL11A1P12107 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
COL11A1P12107 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL11A1P12107 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL11A1P12107 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.52■□□□□ 0.72
COL11A1P12107 NEFHP1-201ENST00000412845 2629 ntBASIC19.52■□□□□ 0.72
COL11A1P12107 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL11A1P12107 FAM58DP-201ENST00000428076 619 ntBASIC19.52■□□□□ 0.72
COL11A1P12107 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
COL11A1P12107 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL11A1P12107 AC093214.1-201ENST00000511688 1107 ntBASIC19.52■□□□□ 0.72
COL11A1P12107 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL11A1P12107 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL11A1P12107 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.52■□□□□ 0.72
COL11A1P12107 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL11A1P12107 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.52■□□□□ 0.72
COL11A1P12107 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.52■□□□□ 0.72
COL11A1P12107 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COL11A1P12107 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
COL11A1P12107 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COL11A1P12107 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
COL11A1P12107 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
COL11A1P12107 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL11A1P12107 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL11A1P12107 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COL11A1P12107 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL11A1P12107 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COL11A1P12107 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL11A1P12107 AL035633.1-201ENST00000406139 838 ntBASIC19.51■□□□□ 0.71
COL11A1P12107 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL11A1P12107 AC243562.1-201ENST00000560672 389 ntBASIC19.51■□□□□ 0.71
COL11A1P12107 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
COL11A1P12107 AC005412.3-201ENST00000580309 715 ntBASIC19.51■□□□□ 0.71
COL11A1P12107 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.51■□□□□ 0.71
COL11A1P12107 AC004835.2-201ENST00000603762 682 ntBASIC19.51■□□□□ 0.71
COL11A1P12107 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
COL11A1P12107 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL11A1P12107 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL11A1P12107 AL138688.1-201ENST00000624851 1594 ntBASIC19.51■□□□□ 0.71
COL11A1P12107 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL11A1P12107 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.51■□□□□ 0.71
COL11A1P12107 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL11A1P12107 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.51■□□□□ 0.71
COL11A1P12107 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.51■□□□□ 0.71
COL11A1P12107 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL11A1P12107 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.51■□□□□ 0.71
COL11A1P12107 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.51■□□□□ 0.71
COL11A1P12107 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL11A1P12107 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL11A1P12107 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL11A1P12107 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL11A1P12107 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL11A1P12107 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
COL11A1P12107 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL11A1P12107 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms