Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPRFP10586 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPRFP10586 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPRFP10586 TSPY16P-201ENST00000449843 468 ntBASIC19.72■□□□□ 0.75
PTPRFP10586 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.72■□□□□ 0.75
PTPRFP10586 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPRFP10586 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.72■□□□□ 0.75
PTPRFP10586 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.72■□□□□ 0.75
PTPRFP10586 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PTPRFP10586 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPRFP10586 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPRFP10586 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPRFP10586 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
PTPRFP10586 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPRFP10586 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPRFP10586 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPRFP10586 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPRFP10586 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPRFP10586 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPRFP10586 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPRFP10586 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPRFP10586 RBPMS2P1-201ENST00000437762 623 ntBASIC19.72■□□□□ 0.75
PTPRFP10586 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPRFP10586 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.72■□□□□ 0.75
PTPRFP10586 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.72■□□□□ 0.75
PTPRFP10586 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPRFP10586 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.72■□□□□ 0.75
PTPRFP10586 MIR4745-201ENST00000577608 62 ntBASIC19.72■□□□□ 0.75
PTPRFP10586 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPRFP10586 AL158211.3-201ENST00000607385 239 ntBASIC19.72■□□□□ 0.75
PTPRFP10586 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPRFP10586 AC009113.1-201ENST00000570267 2443 ntBASIC19.72■□□□□ 0.75
PTPRFP10586 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPRFP10586 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPRFP10586 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPRFP10586 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PTPRFP10586 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPRFP10586 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
PTPRFP10586 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPRFP10586 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPRFP10586 TUBB3P1-201ENST00000405796 1332 ntBASIC19.71■□□□□ 0.75
PTPRFP10586 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPRFP10586 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPRFP10586 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.71■□□□□ 0.75
PTPRFP10586 CRB3P1-201ENST00000449338 276 ntBASIC19.71■□□□□ 0.75
PTPRFP10586 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPRFP10586 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPRFP10586 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPRFP10586 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPRFP10586 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPRFP10586 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPRFP10586 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPRFP10586 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPRFP10586 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.71■□□□□ 0.75
PTPRFP10586 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPRFP10586 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPRFP10586 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPRFP10586 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPRFP10586 AL671277.1-201ENST00000429656 993 ntBASIC19.7■□□□□ 0.74
PTPRFP10586 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.7■□□□□ 0.74
PTPRFP10586 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.7■□□□□ 0.74
PTPRFP10586 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.7■□□□□ 0.74
PTPRFP10586 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPRFP10586 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
PTPRFP10586 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.7■□□□□ 0.74
PTPRFP10586 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.7■□□□□ 0.74
PTPRFP10586 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.7■□□□□ 0.74
PTPRFP10586 AC026150.2-201ENST00000564693 1156 ntBASIC19.7■□□□□ 0.74
PTPRFP10586 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.7■□□□□ 0.74
PTPRFP10586 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPRFP10586 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPRFP10586 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.7■□□□□ 0.74
PTPRFP10586 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPRFP10586 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPRFP10586 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.7■□□□□ 0.74
PTPRFP10586 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPRFP10586 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPRFP10586 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPRFP10586 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.7■□□□□ 0.74
PTPRFP10586 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.7■□□□□ 0.74
PTPRFP10586 AC092474.2-201ENST00000424288 719 ntBASIC19.7■□□□□ 0.74
PTPRFP10586 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPRFP10586 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.7■□□□□ 0.74
PTPRFP10586 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.7■□□□□ 0.74
PTPRFP10586 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPRFP10586 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPRFP10586 UXT-AS1-201ENST00000590504 1525 ntBASIC19.7■□□□□ 0.74
PTPRFP10586 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPRFP10586 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.69■□□□□ 0.74
PTPRFP10586 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.69■□□□□ 0.74
PTPRFP10586 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPRFP10586 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPRFP10586 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPRFP10586 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.69■□□□□ 0.74
PTPRFP10586 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.69■□□□□ 0.74
PTPRFP10586 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.69■□□□□ 0.74
PTPRFP10586 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.69■□□□□ 0.74
PTPRFP10586 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.69■□□□□ 0.74
PTPRFP10586 AC190387.1-201ENST00000551683 408 ntBASIC19.69■□□□□ 0.74
PTPRFP10586 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms