Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.26■□□□□ 0.51
RARAP10276 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.26■□□□□ 0.51
RARAP10276 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RARAP10276 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.26■□□□□ 0.51
RARAP10276 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RARAP10276 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.26■□□□□ 0.51
RARAP10276 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RARAP10276 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.26■□□□□ 0.51
RARAP10276 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RARAP10276 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.26■□□□□ 0.51
RARAP10276 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RARAP10276 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RARAP10276 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
RARAP10276 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RARAP10276 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RARAP10276 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RARAP10276 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RARAP10276 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RARAP10276 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.26■□□□□ 0.51
RARAP10276 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RARAP10276 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.25■□□□□ 0.51
RARAP10276 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RARAP10276 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.25■□□□□ 0.51
RARAP10276 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RARAP10276 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RARAP10276 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RARAP10276 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RARAP10276 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RARAP10276 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.25■□□□□ 0.51
RARAP10276 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RARAP10276 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
RARAP10276 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RARAP10276 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RARAP10276 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RARAP10276 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RARAP10276 ARMC10P1-201ENST00000313754 855 ntBASIC18.25■□□□□ 0.51
RARAP10276 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RARAP10276 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RARAP10276 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.25■□□□□ 0.51
RARAP10276 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.25■□□□□ 0.51
RARAP10276 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RARAP10276 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.25■□□□□ 0.51
RARAP10276 MIR3180-1-201ENST00000580374 94 ntBASIC18.25■□□□□ 0.51
RARAP10276 MIR3180-3-201ENST00000584616 94 ntBASIC18.25■□□□□ 0.51
RARAP10276 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RARAP10276 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
RARAP10276 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RARAP10276 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
RARAP10276 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.25■□□□□ 0.51
RARAP10276 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.25■□□□□ 0.51
RARAP10276 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RARAP10276 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RARAP10276 AC046185.3-201ENST00000623228 1824 ntBASIC18.25■□□□□ 0.51
RARAP10276 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RARAP10276 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.25■□□□□ 0.51
RARAP10276 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RARAP10276 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RARAP10276 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RARAP10276 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RARAP10276 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RARAP10276 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.25■□□□□ 0.51
RARAP10276 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RARAP10276 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RARAP10276 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.24■□□□□ 0.51
RARAP10276 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.24■□□□□ 0.51
RARAP10276 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.24■□□□□ 0.51
RARAP10276 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RARAP10276 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RARAP10276 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RARAP10276 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.24■□□□□ 0.51
RARAP10276 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RARAP10276 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.24■□□□□ 0.51
RARAP10276 MIR1224-201ENST00000408193 85 ntBASIC18.24■□□□□ 0.51
RARAP10276 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
RARAP10276 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.24■□□□□ 0.51
RARAP10276 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 Z69720.1-201ENST00000601483 472 ntBASIC18.24■□□□□ 0.51
RARAP10276 NPAP1P7-201ENST00000613027 823 ntBASIC18.24■□□□□ 0.51
RARAP10276 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.24■□□□□ 0.51
RARAP10276 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.24■□□□□ 0.51
RARAP10276 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.24■□□□□ 0.51
RARAP10276 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.24■□□□□ 0.51
RARAP10276 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.24■□□□□ 0.51
RARAP10276 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RARAP10276 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms