Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CD4P01730 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.13■□□□□ 0.65
CD4P01730 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.13■□□□□ 0.65
CD4P01730 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.13■□□□□ 0.65
CD4P01730 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD4P01730 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD4P01730 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD4P01730 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CD4P01730 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD4P01730 AL020996.1-203ENST00000536896 2307 ntBASIC19.12■□□□□ 0.65
CD4P01730 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD4P01730 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.12■□□□□ 0.65
CD4P01730 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD4P01730 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD4P01730 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.12■□□□□ 0.65
CD4P01730 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.12■□□□□ 0.65
CD4P01730 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.12■□□□□ 0.65
CD4P01730 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD4P01730 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CD4P01730 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD4P01730 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD4P01730 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD4P01730 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD4P01730 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD4P01730 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD4P01730 AC092474.2-201ENST00000424288 719 ntBASIC19.12■□□□□ 0.65
CD4P01730 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD4P01730 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD4P01730 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD4P01730 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.12■□□□□ 0.65
CD4P01730 AC093520.2-201ENST00000561830 333 ntBASIC19.12■□□□□ 0.65
CD4P01730 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD4P01730 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.12■□□□□ 0.65
CD4P01730 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.12■□□□□ 0.65
CD4P01730 ACTL9-202ENST00000612068 1252 ntBASIC19.12■□□□□ 0.65
CD4P01730 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.12■□□□□ 0.65
CD4P01730 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.12■□□□□ 0.65
CD4P01730 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD4P01730 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CD4P01730 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD4P01730 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.12■□□□□ 0.65
CD4P01730 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CD4P01730 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.12■□□□□ 0.65
CD4P01730 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD4P01730 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
CD4P01730 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD4P01730 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.11■□□□□ 0.65
CD4P01730 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD4P01730 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD4P01730 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.11■□□□□ 0.65
CD4P01730 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD4P01730 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD4P01730 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.11■□□□□ 0.65
CD4P01730 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.11■□□□□ 0.65
CD4P01730 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD4P01730 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD4P01730 MYCLP1-201ENST00000372451 1075 ntBASIC19.11■□□□□ 0.65
CD4P01730 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.11■□□□□ 0.65
CD4P01730 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.11■□□□□ 0.65
CD4P01730 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD4P01730 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.11■□□□□ 0.65
CD4P01730 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CD4P01730 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.11■□□□□ 0.65
CD4P01730 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CD4P01730 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.11■□□□□ 0.65
CD4P01730 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD4P01730 AL390955.2-201ENST00000603032 514 ntBASIC19.11■□□□□ 0.65
CD4P01730 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CD4P01730 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD4P01730 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD4P01730 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD4P01730 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD4P01730 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD4P01730 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD4P01730 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CD4P01730 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD4P01730 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD4P01730 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CD4P01730 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CD4P01730 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.1■□□□□ 0.65
CD4P01730 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.1■□□□□ 0.65
CD4P01730 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.1■□□□□ 0.65
CD4P01730 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD4P01730 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD4P01730 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.1■□□□□ 0.65
CD4P01730 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD4P01730 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD4P01730 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD4P01730 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.1■□□□□ 0.65
CD4P01730 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.1■□□□□ 0.65
CD4P01730 AC112191.1-201ENST00000523689 701 ntBASIC19.1■□□□□ 0.65
CD4P01730 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD4P01730 MIR4745-201ENST00000577608 62 ntBASIC19.1■□□□□ 0.65
CD4P01730 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.1■□□□□ 0.65
CD4P01730 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CD4P01730 AC009093.7-201ENST00000623853 1223 ntBASIC19.1■□□□□ 0.65
CD4P01730 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.1■□□□□ 0.65
CD4P01730 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD4P01730 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.1■□□□□ 0.65
CD4P01730 AC135050.7-201ENST00000624508 2218 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms