Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG5O95196 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CSPG5O95196 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CSPG5O95196 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CSPG5O95196 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CSPG5O95196 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.64■□□□□ 0.57
CSPG5O95196 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG5O95196 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG5O95196 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG5O95196 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.64■□□□□ 0.57
CSPG5O95196 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG5O95196 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG5O95196 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG5O95196 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.64■□□□□ 0.57
CSPG5O95196 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CSPG5O95196 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG5O95196 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.64■□□□□ 0.57
CSPG5O95196 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.64■□□□□ 0.57
CSPG5O95196 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG5O95196 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CSPG5O95196 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.64■□□□□ 0.57
CSPG5O95196 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG5O95196 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG5O95196 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG5O95196 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG5O95196 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
CSPG5O95196 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG5O95196 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.63■□□□□ 0.57
CSPG5O95196 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG5O95196 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG5O95196 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG5O95196 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG5O95196 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG5O95196 STK19B-204ENST00000512515 211 ntBASIC18.63■□□□□ 0.57
CSPG5O95196 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG5O95196 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.63■□□□□ 0.57
CSPG5O95196 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.63■□□□□ 0.57
CSPG5O95196 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.63■□□□□ 0.57
CSPG5O95196 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG5O95196 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.63■□□□□ 0.57
CSPG5O95196 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CSPG5O95196 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CSPG5O95196 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.63■□□□□ 0.57
CSPG5O95196 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CSPG5O95196 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG5O95196 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG5O95196 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CSPG5O95196 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG5O95196 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.63■□□□□ 0.57
CSPG5O95196 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG5O95196 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG5O95196 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CSPG5O95196 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG5O95196 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CSPG5O95196 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CSPG5O95196 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG5O95196 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG5O95196 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG5O95196 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG5O95196 LTB4R2-202ENST00000528054 3092 ntBASIC18.63■□□□□ 0.57
CSPG5O95196 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG5O95196 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG5O95196 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.62■□□□□ 0.57
CSPG5O95196 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CSPG5O95196 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CSPG5O95196 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG5O95196 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG5O95196 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG5O95196 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG5O95196 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG5O95196 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG5O95196 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CSPG5O95196 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG5O95196 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.62■□□□□ 0.57
CSPG5O95196 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG5O95196 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG5O95196 AC003669.1-201ENST00000334569 611 ntBASIC18.62■□□□□ 0.57
CSPG5O95196 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.62■□□□□ 0.57
CSPG5O95196 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG5O95196 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG5O95196 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.62■□□□□ 0.57
CSPG5O95196 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.62■□□□□ 0.57
CSPG5O95196 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.62■□□□□ 0.57
CSPG5O95196 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.62■□□□□ 0.57
CSPG5O95196 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG5O95196 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.62■□□□□ 0.57
CSPG5O95196 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG5O95196 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG5O95196 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.62■□□□□ 0.57
CSPG5O95196 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
CSPG5O95196 AC009949.1-201ENST00000623048 1830 ntBASIC18.62■□□□□ 0.57
CSPG5O95196 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG5O95196 CROCCP3-202ENST00000420820 1947 ntBASIC18.62■□□□□ 0.57
CSPG5O95196 AL096828.2-201ENST00000567259 1965 ntBASIC18.62■□□□□ 0.57
CSPG5O95196 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG5O95196 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG5O95196 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG5O95196 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CSPG5O95196 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CSPG5O95196 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms