Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.47■□□□□ 0.39
GPC4O75487 AP005901.3-202ENST00000581653 237 ntBASIC17.47■□□□□ 0.39
GPC4O75487 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.47■□□□□ 0.39
GPC4O75487 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
GPC4O75487 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.47■□□□□ 0.39
GPC4O75487 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
GPC4O75487 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GPC4O75487 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GPC4O75487 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
GPC4O75487 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
GPC4O75487 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
GPC4O75487 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GPC4O75487 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.47■□□□□ 0.39
GPC4O75487 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 AC125634.1-201ENST00000438758 1403 ntBASIC17.47■□□□□ 0.39
GPC4O75487 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.47■□□□□ 0.39
GPC4O75487 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.46■□□□□ 0.39
GPC4O75487 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC4O75487 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GPC4O75487 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.46■□□□□ 0.39
GPC4O75487 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.46■□□□□ 0.39
GPC4O75487 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.46■□□□□ 0.39
GPC4O75487 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
GPC4O75487 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
GPC4O75487 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC4O75487 AC233702.3-201ENST00000578656 1387 ntBASIC17.46■□□□□ 0.39
GPC4O75487 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC4O75487 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC4O75487 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GPC4O75487 UPK3BP1-201ENST00000428678 509 ntBASIC17.46■□□□□ 0.39
GPC4O75487 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GPC4O75487 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.46■□□□□ 0.39
GPC4O75487 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.46■□□□□ 0.39
GPC4O75487 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.46■□□□□ 0.39
GPC4O75487 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.46■□□□□ 0.39
GPC4O75487 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
GPC4O75487 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.46■□□□□ 0.39
GPC4O75487 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.46■□□□□ 0.39
GPC4O75487 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC4O75487 AL138831.2-201ENST00000606564 490 ntBASIC17.46■□□□□ 0.39
GPC4O75487 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
GPC4O75487 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.46■□□□□ 0.39
GPC4O75487 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC4O75487 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
GPC4O75487 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC4O75487 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
GPC4O75487 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC4O75487 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GPC4O75487 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GPC4O75487 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
GPC4O75487 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.38
GPC4O75487 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
GPC4O75487 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
GPC4O75487 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.45■□□□□ 0.38
GPC4O75487 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
GPC4O75487 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.45■□□□□ 0.38
GPC4O75487 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC4O75487 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GPC4O75487 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC4O75487 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.45■□□□□ 0.38
GPC4O75487 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
GPC4O75487 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GPC4O75487 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GPC4O75487 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC4O75487 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.45■□□□□ 0.38
GPC4O75487 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.45■□□□□ 0.38
GPC4O75487 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC4O75487 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GPC4O75487 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC4O75487 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GPC4O75487 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.45■□□□□ 0.38
GPC4O75487 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.45■□□□□ 0.38
GPC4O75487 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.45■□□□□ 0.38
GPC4O75487 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC4O75487 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GPC4O75487 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC4O75487 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.45■□□□□ 0.38
GPC4O75487 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC4O75487 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC4O75487 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
GPC4O75487 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.45■□□□□ 0.38
GPC4O75487 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC4O75487 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC4O75487 AP001094.4-201ENST00000579008 2176 ntBASIC17.45■□□□□ 0.38
GPC4O75487 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
GPC4O75487 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.44■□□□□ 0.38
GPC4O75487 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC4O75487 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC4O75487 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC4O75487 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GPC4O75487 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
GPC4O75487 AC084018.2-201ENST00000613093 2607 ntBASIC17.44■□□□□ 0.38
GPC4O75487 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms