Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A3O75365 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A3O75365 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PTP4A3O75365 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A3O75365 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.68■□□□□ 0.1
PTP4A3O75365 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PTP4A3O75365 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PTP4A3O75365 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
PTP4A3O75365 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A3O75365 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A3O75365 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.68■□□□□ 0.1
PTP4A3O75365 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A3O75365 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A3O75365 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PTP4A3O75365 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A3O75365 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
PTP4A3O75365 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PTP4A3O75365 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PTP4A3O75365 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.67■□□□□ 0.1
PTP4A3O75365 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.67■□□□□ 0.1
PTP4A3O75365 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PTP4A3O75365 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PTP4A3O75365 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A3O75365 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A3O75365 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A3O75365 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A3O75365 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PTP4A3O75365 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
PTP4A3O75365 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.67■□□□□ 0.1
PTP4A3O75365 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A3O75365 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A3O75365 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A3O75365 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A3O75365 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
PTP4A3O75365 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A3O75365 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.67■□□□□ 0.1
PTP4A3O75365 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A3O75365 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.67■□□□□ 0.1
PTP4A3O75365 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A3O75365 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.67■□□□□ 0.1
PTP4A3O75365 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A3O75365 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.67■□□□□ 0.1
PTP4A3O75365 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PTP4A3O75365 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.67■□□□□ 0.1
PTP4A3O75365 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A3O75365 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.67■□□□□ 0.1
PTP4A3O75365 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A3O75365 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PTP4A3O75365 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.67■□□□□ 0.1
PTP4A3O75365 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.67■□□□□ 0.1
PTP4A3O75365 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A3O75365 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A3O75365 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.67■□□□□ 0.1
PTP4A3O75365 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PTP4A3O75365 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A3O75365 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PTP4A3O75365 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A3O75365 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.67■□□□□ 0.1
PTP4A3O75365 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A3O75365 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PTP4A3O75365 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PTP4A3O75365 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.66■□□□□ 0.1
PTP4A3O75365 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
PTP4A3O75365 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PTP4A3O75365 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 AC246785.2-201ENST00000432512 513 ntBASIC15.66■□□□□ 0.1
PTP4A3O75365 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.66■□□□□ 0.1
PTP4A3O75365 RN7SL850P-201ENST00000579959 291 ntBASIC15.66■□□□□ 0.1
PTP4A3O75365 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.66■□□□□ 0.1
PTP4A3O75365 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PTP4A3O75365 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PTP4A3O75365 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PTP4A3O75365 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PTP4A3O75365 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
PTP4A3O75365 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms