Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CPNE3O75131 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.72■□□□□ 0.27
CPNE3O75131 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE3O75131 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE3O75131 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.72■□□□□ 0.27
CPNE3O75131 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE3O75131 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE3O75131 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CPNE3O75131 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.72■□□□□ 0.27
CPNE3O75131 ABALON-201ENST00000629058 1903 ntBASIC16.72■□□□□ 0.27
CPNE3O75131 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE3O75131 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CPNE3O75131 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.72■□□□□ 0.27
CPNE3O75131 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CPNE3O75131 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE3O75131 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE3O75131 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE3O75131 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE3O75131 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CPNE3O75131 AC104109.2-201ENST00000602919 1418 ntBASIC16.71■□□□□ 0.27
CPNE3O75131 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE3O75131 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE3O75131 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE3O75131 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CPNE3O75131 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CPNE3O75131 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CPNE3O75131 AC135776.1-201ENST00000319817 2481 ntBASIC16.71■□□□□ 0.27
CPNE3O75131 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE3O75131 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE3O75131 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE3O75131 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE3O75131 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
CPNE3O75131 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE3O75131 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.71■□□□□ 0.27
CPNE3O75131 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.71■□□□□ 0.27
CPNE3O75131 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.71■□□□□ 0.27
CPNE3O75131 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.71■□□□□ 0.27
CPNE3O75131 AC012640.2-201ENST00000561606 901 ntBASIC16.71■□□□□ 0.27
CPNE3O75131 AC145285.3-201ENST00000564603 959 ntBASIC16.71■□□□□ 0.27
CPNE3O75131 TERC-201ENST00000602385 541 ntBASIC16.71■□□□□ 0.27
CPNE3O75131 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CPNE3O75131 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE3O75131 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE3O75131 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.71■□□□□ 0.27
CPNE3O75131 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE3O75131 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE3O75131 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE3O75131 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE3O75131 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
CPNE3O75131 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
CPNE3O75131 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
CPNE3O75131 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CPNE3O75131 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
CPNE3O75131 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE3O75131 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.7■□□□□ 0.26
CPNE3O75131 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE3O75131 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE3O75131 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CPNE3O75131 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.7■□□□□ 0.26
CPNE3O75131 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.7■□□□□ 0.26
CPNE3O75131 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE3O75131 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE3O75131 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 POLD2P1-201ENST00000511220 997 ntBASIC16.7■□□□□ 0.26
CPNE3O75131 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.7■□□□□ 0.26
CPNE3O75131 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.7■□□□□ 0.26
CPNE3O75131 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE3O75131 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.7■□□□□ 0.26
CPNE3O75131 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.7■□□□□ 0.26
CPNE3O75131 AC006557.2-201ENST00000592985 1240 ntBASIC16.7■□□□□ 0.26
CPNE3O75131 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE3O75131 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 AC006538.3-201ENST00000612495 578 ntBASIC16.7■□□□□ 0.26
CPNE3O75131 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms