Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CTNSO60931 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.29■□□□□ 0.2
CTNSO60931 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.29■□□□□ 0.2
CTNSO60931 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.29■□□□□ 0.2
CTNSO60931 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CTNSO60931 ACTG1P4-201ENST00000425123 1122 ntBASIC16.29■□□□□ 0.2
CTNSO60931 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.29■□□□□ 0.2
CTNSO60931 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.29■□□□□ 0.2
CTNSO60931 AL121894.2-201ENST00000602977 491 ntBASIC16.29■□□□□ 0.2
CTNSO60931 AC025062.2-201ENST00000605477 670 ntBASIC16.29■□□□□ 0.2
CTNSO60931 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.29■□□□□ 0.2
CTNSO60931 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.29■□□□□ 0.2
CTNSO60931 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CTNSO60931 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNSO60931 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CTNSO60931 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.29■□□□□ 0.2
CTNSO60931 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNSO60931 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNSO60931 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.29■□□□□ 0.2
CTNSO60931 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNSO60931 NCF1C-201ENST00000438382 1427 ntBASIC16.28■□□□□ 0.2
CTNSO60931 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CTNSO60931 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CTNSO60931 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTNSO60931 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTNSO60931 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTNSO60931 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTNSO60931 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTNSO60931 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CTNSO60931 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTNSO60931 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.28■□□□□ 0.2
CTNSO60931 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.28■□□□□ 0.2
CTNSO60931 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTNSO60931 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.28■□□□□ 0.2
CTNSO60931 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTNSO60931 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.28■□□□□ 0.2
CTNSO60931 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.28■□□□□ 0.2
CTNSO60931 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.28■□□□□ 0.2
CTNSO60931 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.28■□□□□ 0.2
CTNSO60931 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.28■□□□□ 0.2
CTNSO60931 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.28■□□□□ 0.2
CTNSO60931 AC139887.3-201ENST00000568585 713 ntBASIC16.28■□□□□ 0.2
CTNSO60931 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.28■□□□□ 0.2
CTNSO60931 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.28■□□□□ 0.2
CTNSO60931 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTNSO60931 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTNSO60931 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CTNSO60931 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTNSO60931 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.28■□□□□ 0.2
CTNSO60931 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CTNSO60931 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTNSO60931 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTNSO60931 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTNSO60931 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CTNSO60931 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTNSO60931 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNSO60931 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.27■□□□□ 0.2
CTNSO60931 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNSO60931 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNSO60931 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNSO60931 RPS2P28-201ENST00000314255 741 ntBASIC16.27■□□□□ 0.2
CTNSO60931 AC018712.1-201ENST00000455767 687 ntBASIC16.27■□□□□ 0.2
CTNSO60931 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CTNSO60931 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.27■□□□□ 0.2
CTNSO60931 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.27■□□□□ 0.2
CTNSO60931 AL662844.1-201ENST00000546340 181 ntBASIC16.27■□□□□ 0.2
CTNSO60931 AC107918.4-202ENST00000641623 219 ntBASIC16.27■□□□□ 0.2
CTNSO60931 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNSO60931 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNSO60931 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNSO60931 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.27■□□□□ 0.2
CTNSO60931 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNSO60931 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNSO60931 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CTNSO60931 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTNSO60931 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CTNSO60931 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTNSO60931 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTNSO60931 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTNSO60931 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTNSO60931 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.27■□□□□ 0.19
CTNSO60931 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CTNSO60931 CROCCP2-202ENST00000412962 2773 ntBASIC16.26■□□□□ 0.19
CTNSO60931 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CTNSO60931 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNSO60931 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTNSO60931 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNSO60931 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.26■□□□□ 0.19
CTNSO60931 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.26■□□□□ 0.19
CTNSO60931 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNSO60931 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTNSO60931 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CTNSO60931 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNSO60931 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNSO60931 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNSO60931 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CTNSO60931 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.26■□□□□ 0.19
CTNSO60931 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNSO60931 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTNSO60931 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms