Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PFDN1O60925 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.53■□□□□ 0.08
PFDN1O60925 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.53■□□□□ 0.08
PFDN1O60925 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PFDN1O60925 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PFDN1O60925 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PFDN1O60925 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PFDN1O60925 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PFDN1O60925 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PFDN1O60925 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PFDN1O60925 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PFDN1O60925 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.53■□□□□ 0.08
PFDN1O60925 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
PFDN1O60925 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PFDN1O60925 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
PFDN1O60925 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PFDN1O60925 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PFDN1O60925 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PFDN1O60925 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PFDN1O60925 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.52■□□□□ 0.08
PFDN1O60925 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.52■□□□□ 0.08
PFDN1O60925 CICP20-201ENST00000443330 2801 ntBASIC15.52■□□□□ 0.08
PFDN1O60925 AC116353.5-201ENST00000638148 1699 ntBASIC15.52■□□□□ 0.08
PFDN1O60925 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PFDN1O60925 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.52■□□□□ 0.08
PFDN1O60925 IGHV3-19-201ENST00000521488 291 ntBASIC15.52■□□□□ 0.08
PFDN1O60925 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PFDN1O60925 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.52■□□□□ 0.08
PFDN1O60925 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PFDN1O60925 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PFDN1O60925 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PFDN1O60925 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PFDN1O60925 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.52■□□□□ 0.07
PFDN1O60925 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PFDN1O60925 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PFDN1O60925 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PFDN1O60925 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.51■□□□□ 0.07
PFDN1O60925 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.51■□□□□ 0.07
PFDN1O60925 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.51■□□□□ 0.07
PFDN1O60925 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.51■□□□□ 0.07
PFDN1O60925 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.51■□□□□ 0.07
PFDN1O60925 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.51■□□□□ 0.07
PFDN1O60925 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 AC005840.4-201ENST00000541242 2494 ntBASIC15.51■□□□□ 0.07
PFDN1O60925 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PFDN1O60925 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.51■□□□□ 0.07
PFDN1O60925 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.51■□□□□ 0.07
PFDN1O60925 CDV3P1-201ENST00000471403 739 ntBASIC15.51■□□□□ 0.07
PFDN1O60925 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.51■□□□□ 0.07
PFDN1O60925 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC15.51■□□□□ 0.07
PFDN1O60925 AC126544.1-201ENST00000580842 1059 ntBASIC15.51■□□□□ 0.07
PFDN1O60925 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.51■□□□□ 0.07
PFDN1O60925 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PFDN1O60925 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PFDN1O60925 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.51■□□□□ 0.07
PFDN1O60925 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PFDN1O60925 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PFDN1O60925 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.5■□□□□ 0.07
PFDN1O60925 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PFDN1O60925 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PFDN1O60925 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
PFDN1O60925 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
PFDN1O60925 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.5■□□□□ 0.07
PFDN1O60925 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PFDN1O60925 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PFDN1O60925 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 AC138907.5-202ENST00000569484 235 ntBASIC15.5■□□□□ 0.07
PFDN1O60925 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms