Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.93■□□□□ 0.46
TSPAN3O60637 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TSPAN3O60637 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
TSPAN3O60637 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.93■□□□□ 0.46
TSPAN3O60637 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TSPAN3O60637 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.93■□□□□ 0.46
TSPAN3O60637 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TSPAN3O60637 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TSPAN3O60637 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TSPAN3O60637 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TSPAN3O60637 AC046185.3-201ENST00000623228 1824 ntBASIC17.93■□□□□ 0.46
TSPAN3O60637 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TSPAN3O60637 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TSPAN3O60637 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TSPAN3O60637 ZNF259P1-201ENST00000407656 1365 ntBASIC17.92■□□□□ 0.46
TSPAN3O60637 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TSPAN3O60637 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TSPAN3O60637 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TSPAN3O60637 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TSPAN3O60637 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TSPAN3O60637 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TSPAN3O60637 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.92■□□□□ 0.46
TSPAN3O60637 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.92■□□□□ 0.46
TSPAN3O60637 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TSPAN3O60637 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.92■□□□□ 0.46
TSPAN3O60637 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TSPAN3O60637 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TSPAN3O60637 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.92■□□□□ 0.46
TSPAN3O60637 LINC00982-205ENST00000420957 435 ntBASIC17.92■□□□□ 0.46
TSPAN3O60637 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.92■□□□□ 0.46
TSPAN3O60637 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.92■□□□□ 0.46
TSPAN3O60637 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.92■□□□□ 0.46
TSPAN3O60637 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TSPAN3O60637 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.92■□□□□ 0.46
TSPAN3O60637 AL139327.4-201ENST00000612362 153 ntBASIC17.92■□□□□ 0.46
TSPAN3O60637 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.92■□□□□ 0.46
TSPAN3O60637 AC005593.1-201ENST00000624894 515 ntBASIC17.92■□□□□ 0.46
TSPAN3O60637 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TSPAN3O60637 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TSPAN3O60637 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TSPAN3O60637 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.92■□□□□ 0.46
TSPAN3O60637 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TSPAN3O60637 AC134043.2-201ENST00000624206 2238 ntBASIC17.92■□□□□ 0.46
TSPAN3O60637 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TSPAN3O60637 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.92■□□□□ 0.46
TSPAN3O60637 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.92■□□□□ 0.46
TSPAN3O60637 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
TSPAN3O60637 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TSPAN3O60637 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.92■□□□□ 0.46
TSPAN3O60637 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
TSPAN3O60637 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.92■□□□□ 0.46
TSPAN3O60637 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
TSPAN3O60637 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.92■□□□□ 0.46
TSPAN3O60637 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TSPAN3O60637 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TSPAN3O60637 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TSPAN3O60637 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TSPAN3O60637 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TSPAN3O60637 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TSPAN3O60637 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TSPAN3O60637 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TSPAN3O60637 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TSPAN3O60637 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TSPAN3O60637 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TSPAN3O60637 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TSPAN3O60637 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TSPAN3O60637 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TSPAN3O60637 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TSPAN3O60637 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TSPAN3O60637 AC136632.2-201ENST00000512891 861 ntBASIC17.91■□□□□ 0.46
TSPAN3O60637 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.91■□□□□ 0.46
TSPAN3O60637 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.91■□□□□ 0.46
TSPAN3O60637 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.91■□□□□ 0.46
TSPAN3O60637 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.91■□□□□ 0.46
TSPAN3O60637 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TSPAN3O60637 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.91■□□□□ 0.46
TSPAN3O60637 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TSPAN3O60637 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TSPAN3O60637 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.91■□□□□ 0.46
TSPAN3O60637 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TSPAN3O60637 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TSPAN3O60637 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TSPAN3O60637 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TSPAN3O60637 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TSPAN3O60637 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TSPAN3O60637 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.91■□□□□ 0.46
TSPAN3O60637 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.91■□□□□ 0.46
TSPAN3O60637 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.91■□□□□ 0.46
TSPAN3O60637 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.91■□□□□ 0.46
TSPAN3O60637 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.91■□□□□ 0.46
TSPAN3O60637 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TSPAN3O60637 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TSPAN3O60637 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.9■□□□□ 0.46
TSPAN3O60637 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TSPAN3O60637 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.9■□□□□ 0.46
TSPAN3O60637 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.9■□□□□ 0.46
TSPAN3O60637 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TSPAN3O60637 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TSPAN3O60637 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TSPAN3O60637 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms