Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AP000347.1-202ENST00000435868 847 ntBASIC19.56■□□□□ 0.72
CHMP2AO43633 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.56■□□□□ 0.72
CHMP2AO43633 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.56■□□□□ 0.72
CHMP2AO43633 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.56■□□□□ 0.72
CHMP2AO43633 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.56■□□□□ 0.72
CHMP2AO43633 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.56■□□□□ 0.72
CHMP2AO43633 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.56■□□□□ 0.72
CHMP2AO43633 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.56■□□□□ 0.72
CHMP2AO43633 AC139887.3-201ENST00000568585 713 ntBASIC19.56■□□□□ 0.72
CHMP2AO43633 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.56■□□□□ 0.72
CHMP2AO43633 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.56■□□□□ 0.72
CHMP2AO43633 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.56■□□□□ 0.72
CHMP2AO43633 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2AO43633 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2AO43633 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2AO43633 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2AO43633 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
CHMP2AO43633 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CHMP2AO43633 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2AO43633 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2AO43633 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2AO43633 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.56■□□□□ 0.72
CHMP2AO43633 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2AO43633 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2AO43633 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2AO43633 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.55■□□□□ 0.72
CHMP2AO43633 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2AO43633 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2AO43633 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2AO43633 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.55■□□□□ 0.72
CHMP2AO43633 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2AO43633 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2AO43633 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.55■□□□□ 0.72
CHMP2AO43633 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMP2AO43633 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.55■□□□□ 0.72
CHMP2AO43633 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.55■□□□□ 0.72
CHMP2AO43633 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2AO43633 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2AO43633 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2AO43633 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2AO43633 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMP2AO43633 AL135999.2-201ENST00000622438 1686 ntBASIC19.55■□□□□ 0.72
CHMP2AO43633 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2AO43633 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.55■□□□□ 0.72
CHMP2AO43633 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2AO43633 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2AO43633 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2AO43633 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CHMP2AO43633 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.55■□□□□ 0.72
CHMP2AO43633 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2AO43633 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2AO43633 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2AO43633 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CHMP2AO43633 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2AO43633 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2AO43633 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP2AO43633 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2AO43633 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CHMP2AO43633 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2AO43633 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CHMP2AO43633 NCF1C-201ENST00000438382 1427 ntBASIC19.54■□□□□ 0.72
CHMP2AO43633 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2AO43633 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.54■□□□□ 0.72
CHMP2AO43633 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2AO43633 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP2AO43633 AL022342.1-201ENST00000400363 863 ntBASIC19.54■□□□□ 0.72
CHMP2AO43633 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.54■□□□□ 0.72
CHMP2AO43633 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.54■□□□□ 0.72
CHMP2AO43633 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.54■□□□□ 0.72
CHMP2AO43633 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.54■□□□□ 0.72
CHMP2AO43633 SLC25A1P1-201ENST00000528351 927 ntBASIC19.54■□□□□ 0.72
CHMP2AO43633 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.54■□□□□ 0.72
CHMP2AO43633 AC105339.3-201ENST00000560043 636 ntBASIC19.54■□□□□ 0.72
CHMP2AO43633 AL589182.2-201ENST00000619332 1049 ntBASIC19.54■□□□□ 0.72
CHMP2AO43633 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2AO43633 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CHMP2AO43633 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP2AO43633 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CHMP2AO43633 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP2AO43633 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.54■□□□□ 0.72
CHMP2AO43633 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2AO43633 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP2AO43633 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.54■□□□□ 0.72
CHMP2AO43633 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2AO43633 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2AO43633 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP2AO43633 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2AO43633 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2AO43633 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2AO43633 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CHMP2AO43633 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2AO43633 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2AO43633 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2AO43633 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2AO43633 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.53■□□□□ 0.72
CHMP2AO43633 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
CHMP2AO43633 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CHMP2AO43633 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2AO43633 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2AO43633 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms