Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.98■□□□□ 0.79
PRPF3O43395 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPF3O43395 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPF3O43395 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
PRPF3O43395 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPF3O43395 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPF3O43395 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPF3O43395 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PRPF3O43395 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.97■□□□□ 0.79
PRPF3O43395 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.97■□□□□ 0.79
PRPF3O43395 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRPF3O43395 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PRPF3O43395 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.97■□□□□ 0.79
PRPF3O43395 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.97■□□□□ 0.79
PRPF3O43395 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PRPF3O43395 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.97■□□□□ 0.79
PRPF3O43395 AC139887.3-201ENST00000568585 713 ntBASIC19.97■□□□□ 0.79
PRPF3O43395 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.97■□□□□ 0.79
PRPF3O43395 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRPF3O43395 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PRPF3O43395 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PRPF3O43395 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRPF3O43395 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.97■□□□□ 0.79
PRPF3O43395 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRPF3O43395 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRPF3O43395 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRPF3O43395 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PRPF3O43395 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRPF3O43395 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.96■□□□□ 0.79
PRPF3O43395 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRPF3O43395 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRPF3O43395 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRPF3O43395 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRPF3O43395 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.96■□□□□ 0.79
PRPF3O43395 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.96■□□□□ 0.79
PRPF3O43395 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PRPF3O43395 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRPF3O43395 AC018712.1-201ENST00000455767 687 ntBASIC19.96■□□□□ 0.79
PRPF3O43395 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.96■□□□□ 0.79
PRPF3O43395 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.96■□□□□ 0.79
PRPF3O43395 AL160237.2-201ENST00000556165 472 ntBASIC19.96■□□□□ 0.79
PRPF3O43395 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.96■□□□□ 0.79
PRPF3O43395 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.96■□□□□ 0.79
PRPF3O43395 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.96■□□□□ 0.79
PRPF3O43395 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.96■□□□□ 0.79
PRPF3O43395 AC004706.3-202ENST00000621574 984 ntBASIC19.96■□□□□ 0.79
PRPF3O43395 AC107918.4-202ENST00000641623 219 ntBASIC19.96■□□□□ 0.79
PRPF3O43395 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.96■□□□□ 0.79
PRPF3O43395 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRPF3O43395 AL590787.1-201ENST00000568856 1315 ntBASIC19.96■□□□□ 0.79
PRPF3O43395 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PRPF3O43395 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRPF3O43395 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRPF3O43395 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRPF3O43395 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PRPF3O43395 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRPF3O43395 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRPF3O43395 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.79
PRPF3O43395 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PRPF3O43395 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRPF3O43395 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.95■□□□□ 0.78
PRPF3O43395 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.95■□□□□ 0.78
PRPF3O43395 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.95■□□□□ 0.78
PRPF3O43395 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRPF3O43395 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRPF3O43395 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRPF3O43395 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRPF3O43395 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PRPF3O43395 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRPF3O43395 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.95■□□□□ 0.78
PRPF3O43395 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRPF3O43395 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.95■□□□□ 0.78
PRPF3O43395 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.95■□□□□ 0.78
PRPF3O43395 TPM4P1-201ENST00000436100 807 ntBASIC19.95■□□□□ 0.78
PRPF3O43395 HNRNPDP1-201ENST00000439535 754 ntBASIC19.95■□□□□ 0.78
PRPF3O43395 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.95■□□□□ 0.78
PRPF3O43395 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PRPF3O43395 AC073648.2-201ENST00000510116 352 ntBASIC19.95■□□□□ 0.78
PRPF3O43395 AP002469.2-201ENST00000531724 424 ntBASIC19.95■□□□□ 0.78
PRPF3O43395 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.95■□□□□ 0.78
PRPF3O43395 AL139424.1-201ENST00000607572 797 ntBASIC19.95■□□□□ 0.78
PRPF3O43395 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PRPF3O43395 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRPF3O43395 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRPF3O43395 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.95■□□□□ 0.78
PRPF3O43395 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PRPF3O43395 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRPF3O43395 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRPF3O43395 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRPF3O43395 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.94■□□□□ 0.78
PRPF3O43395 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRPF3O43395 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PRPF3O43395 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRPF3O43395 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRPF3O43395 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRPF3O43395 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRPF3O43395 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.94■□□□□ 0.78
PRPF3O43395 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRPF3O43395 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.94■□□□□ 0.78
PRPF3O43395 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms