Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.32■□□□□ 0.36
PHGDHO43175 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.32■□□□□ 0.36
PHGDHO43175 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.32■□□□□ 0.36
PHGDHO43175 AC125634.1-201ENST00000438758 1403 ntBASIC17.32■□□□□ 0.36
PHGDHO43175 AGGF1P2-201ENST00000426656 2106 ntBASIC17.32■□□□□ 0.36
PHGDHO43175 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.32■□□□□ 0.36
PHGDHO43175 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.32■□□□□ 0.36
PHGDHO43175 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.32■□□□□ 0.36
PHGDHO43175 AC092053.1-201ENST00000605787 1936 ntBASIC17.32■□□□□ 0.36
PHGDHO43175 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.32■□□□□ 0.36
PHGDHO43175 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.32■□□□□ 0.36
PHGDHO43175 AC005336.2-201ENST00000593183 939 ntBASIC17.32■□□□□ 0.36
PHGDHO43175 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.32■□□□□ 0.36
PHGDHO43175 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.32■□□□□ 0.36
PHGDHO43175 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PHGDHO43175 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PHGDHO43175 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 AC005915.1-201ENST00000624912 2018 ntBASIC17.31■□□□□ 0.36
PHGDHO43175 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.31■□□□□ 0.36
PHGDHO43175 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PHGDHO43175 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHGDHO43175 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHGDHO43175 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHGDHO43175 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHGDHO43175 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHGDHO43175 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHGDHO43175 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHGDHO43175 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
PHGDHO43175 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.31■□□□□ 0.36
PHGDHO43175 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
PHGDHO43175 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PHGDHO43175 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.31■□□□□ 0.36
PHGDHO43175 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHGDHO43175 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHGDHO43175 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.31■□□□□ 0.36
PHGDHO43175 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.31■□□□□ 0.36
PHGDHO43175 UBALD1-205ENST00000590891 2641 ntBASIC17.31■□□□□ 0.36
PHGDHO43175 AC093525.9-201ENST00000624961 1746 ntBASIC17.31■□□□□ 0.36
PHGDHO43175 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
PHGDHO43175 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PHGDHO43175 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.31■□□□□ 0.36
PHGDHO43175 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHGDHO43175 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.31■□□□□ 0.36
PHGDHO43175 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.31■□□□□ 0.36
PHGDHO43175 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.31■□□□□ 0.36
PHGDHO43175 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PHGDHO43175 AC011498.5-201ENST00000592027 486 ntBASIC17.31■□□□□ 0.36
PHGDHO43175 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.31■□□□□ 0.36
PHGDHO43175 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.31■□□□□ 0.36
PHGDHO43175 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.31■□□□□ 0.36
PHGDHO43175 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.31■□□□□ 0.36
PHGDHO43175 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.31■□□□□ 0.36
PHGDHO43175 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PHGDHO43175 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PHGDHO43175 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PHGDHO43175 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHGDHO43175 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.31■□□□□ 0.36
PHGDHO43175 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PHGDHO43175 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PHGDHO43175 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.31■□□□□ 0.36
PHGDHO43175 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
PHGDHO43175 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHGDHO43175 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PHGDHO43175 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.3■□□□□ 0.36
PHGDHO43175 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHGDHO43175 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHGDHO43175 LINC02012-201ENST00000608206 1725 ntBASIC17.3■□□□□ 0.36
PHGDHO43175 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHGDHO43175 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.3■□□□□ 0.36
PHGDHO43175 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHGDHO43175 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
PHGDHO43175 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHGDHO43175 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.3■□□□□ 0.36
PHGDHO43175 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHGDHO43175 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHGDHO43175 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHGDHO43175 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHGDHO43175 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHGDHO43175 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.3■□□□□ 0.36
PHGDHO43175 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.3■□□□□ 0.36
PHGDHO43175 IGHV3-52-201ENST00000519770 353 ntBASIC17.3■□□□□ 0.36
PHGDHO43175 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PHGDHO43175 IGHV3-41-201ENST00000613121 348 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms