Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.3■□□□□ 0.2
RRP8O43159 AC007274.1-201ENST00000439805 662 ntBASIC16.3■□□□□ 0.2
RRP8O43159 KLF2P3-201ENST00000451977 1087 ntBASIC16.3■□□□□ 0.2
RRP8O43159 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.3■□□□□ 0.2
RRP8O43159 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.3■□□□□ 0.2
RRP8O43159 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.3■□□□□ 0.2
RRP8O43159 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.3■□□□□ 0.2
RRP8O43159 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.3■□□□□ 0.2
RRP8O43159 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.3■□□□□ 0.2
RRP8O43159 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RRP8O43159 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.3■□□□□ 0.2
RRP8O43159 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RRP8O43159 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.3■□□□□ 0.2
RRP8O43159 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.3■□□□□ 0.2
RRP8O43159 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RRP8O43159 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RRP8O43159 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RRP8O43159 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.29■□□□□ 0.2
RRP8O43159 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.29■□□□□ 0.2
RRP8O43159 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.29■□□□□ 0.2
RRP8O43159 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RRP8O43159 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
RRP8O43159 AC120498.9-201ENST00000339021 3867 ntBASIC16.29■□□□□ 0.2
RRP8O43159 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RRP8O43159 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RRP8O43159 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.29■□□□□ 0.2
RRP8O43159 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RRP8O43159 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RRP8O43159 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RRP8O43159 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RRP8O43159 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RRP8O43159 AL499627.1-201ENST00000569373 2188 ntBASIC16.29■□□□□ 0.2
RRP8O43159 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RRP8O43159 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RRP8O43159 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RRP8O43159 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.29■□□□□ 0.2
RRP8O43159 AC107890.1-201ENST00000422478 521 ntBASIC16.29■□□□□ 0.2
RRP8O43159 AL671277.1-201ENST00000429656 993 ntBASIC16.29■□□□□ 0.2
RRP8O43159 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RRP8O43159 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.29■□□□□ 0.2
RRP8O43159 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.29■□□□□ 0.2
RRP8O43159 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RRP8O43159 AC069335.1-201ENST00000489972 472 ntBASIC16.29■□□□□ 0.2
RRP8O43159 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.29■□□□□ 0.2
RRP8O43159 IGHV3-52-201ENST00000519770 353 ntBASIC16.29■□□□□ 0.2
RRP8O43159 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.29■□□□□ 0.2
RRP8O43159 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.29■□□□□ 0.2
RRP8O43159 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RRP8O43159 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.29■□□□□ 0.2
RRP8O43159 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.29■□□□□ 0.2
RRP8O43159 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.29■□□□□ 0.2
RRP8O43159 AC008761.3-201ENST00000624803 892 ntBASIC16.29■□□□□ 0.2
RRP8O43159 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.29■□□□□ 0.2
RRP8O43159 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
RRP8O43159 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RRP8O43159 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RRP8O43159 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RRP8O43159 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RRP8O43159 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
RRP8O43159 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RRP8O43159 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RRP8O43159 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RRP8O43159 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.28■□□□□ 0.2
RRP8O43159 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.28■□□□□ 0.2
RRP8O43159 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RRP8O43159 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RRP8O43159 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.28■□□□□ 0.2
RRP8O43159 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.28■□□□□ 0.2
RRP8O43159 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RRP8O43159 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.28■□□□□ 0.2
RRP8O43159 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RRP8O43159 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.28■□□□□ 0.2
RRP8O43159 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.28■□□□□ 0.2
RRP8O43159 OR8S1-201ENST00000310194 1080 ntBASIC16.28■□□□□ 0.2
RRP8O43159 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.28■□□□□ 0.2
RRP8O43159 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RRP8O43159 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.28■□□□□ 0.2
RRP8O43159 KRT18P32-201ENST00000424695 1287 ntBASIC16.28■□□□□ 0.2
RRP8O43159 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
RRP8O43159 AL592309.1-201ENST00000443127 649 ntBASIC16.28■□□□□ 0.2
RRP8O43159 RN7SL589P-201ENST00000481268 310 ntBASIC16.28■□□□□ 0.2
RRP8O43159 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.28■□□□□ 0.2
RRP8O43159 IGHV3-42-201ENST00000520410 361 ntBASIC16.28■□□□□ 0.2
RRP8O43159 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.28■□□□□ 0.2
RRP8O43159 AC051619.7-201ENST00000568314 623 ntBASIC16.28■□□□□ 0.2
RRP8O43159 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RRP8O43159 LINC02560-201ENST00000596379 459 ntBASIC16.28■□□□□ 0.2
RRP8O43159 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.28■□□□□ 0.2
RRP8O43159 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms