Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 ACTG1P4-201ENST00000425123 1122 ntBASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 AC010654.1-201ENST00000615722 808 ntBASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 AC092865.6-201ENST00000642101 219 ntBASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.29■□□□□ 0.36
TBC1D3FA6NER0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 MCCD1P2-201ENST00000423228 335 ntBASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 LINC01451-201ENST00000623792 534 ntBASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 AL135999.2-201ENST00000622438 1686 ntBASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TBC1D3FA6NER0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms