Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 INGX-201ENST00000359239 846 ntBASIC18.9■□□□□ 0.62
CCDC66A2RUB6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 AC024243.1-201ENST00000609234 778 ntBASIC18.9■□□□□ 0.62
CCDC66A2RUB6 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 AC022898.2-201ENST00000616822 1312 ntBASIC18.9■□□□□ 0.62
CCDC66A2RUB6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 AC068587.6-202ENST00000641839 5619 ntBASIC18.9■□□□□ 0.62
CCDC66A2RUB6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC66A2RUB6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CCDC66A2RUB6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC66A2RUB6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC66A2RUB6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC66A2RUB6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 AC009947.2-201ENST00000444014 672 ntBASIC18.89■□□□□ 0.61
CCDC66A2RUB6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 NEK4P2-201ENST00000580004 1012 ntBASIC18.89■□□□□ 0.61
CCDC66A2RUB6 MIR3917-201ENST00000580971 93 ntBASIC18.89■□□□□ 0.61
CCDC66A2RUB6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 AL355312.1-201ENST00000407115 2176 ntBASIC18.89■□□□□ 0.61
CCDC66A2RUB6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC66A2RUB6 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 AC100803.2-201ENST00000562459 1963 ntBASIC18.88■□□□□ 0.61
CCDC66A2RUB6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 AC092865.7-201ENST00000641832 219 ntBASIC18.88■□□□□ 0.61
CCDC66A2RUB6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms