Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRGV4A0A0C4DH28 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRGV4A0A0C4DH28 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC12.52□□□□□ -0.4
TRGV4A0A0C4DH28 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TRGV4A0A0C4DH28 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRGV4A0A0C4DH28 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRGV4A0A0C4DH28 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.52□□□□□ -0.4
TRGV4A0A0C4DH28 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
TRGV4A0A0C4DH28 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRGV4A0A0C4DH28 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 ARMC10P1-201ENST00000313754 855 ntBASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 AC096633.1-201ENST00000422446 749 ntBASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 FAM86EP-206ENST00000510506 987 ntBASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 IGHV3-52-201ENST00000519770 353 ntBASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 KRT18P1-202ENST00000452408 1331 ntBASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 AL138688.1-201ENST00000624851 1594 ntBASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
TRGV4A0A0C4DH28 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 AL023806.1-201ENST00000603994 1649 ntBASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 AC097374.2-201ENST00000618617 1306 ntBASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 AC067930.6-201ENST00000623257 4947 ntBASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV4A0A0C4DH28 REXO1L11P-201ENST00000620964 1927 ntBASIC12.5□□□□□ -0.41
TRGV4A0A0C4DH28 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV4A0A0C4DH28 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
TRGV4A0A0C4DH28 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms