Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 HLA-J-202ENST00000469281 1241 ntBASIC21.93■■□□□ 1.1
LOC102724428A0A0B4J2F2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.93■■□□□ 1.1
LOC102724428A0A0B4J2F2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC21.93■■□□□ 1.1
LOC102724428A0A0B4J2F2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC21.93■■□□□ 1.1
LOC102724428A0A0B4J2F2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.93■■□□□ 1.1
LOC102724428A0A0B4J2F2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LOC102724428A0A0B4J2F2 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.93■■□□□ 1.1
LOC102724428A0A0B4J2F2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
LOC102724428A0A0B4J2F2 UXT-AS1-201ENST00000590504 1525 ntBASIC21.93■■□□□ 1.1
LOC102724428A0A0B4J2F2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LOC102724428A0A0B4J2F2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC21.93■■□□□ 1.1
LOC102724428A0A0B4J2F2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.93■■□□□ 1.1
LOC102724428A0A0B4J2F2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LOC102724428A0A0B4J2F2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LOC102724428A0A0B4J2F2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.92■■□□□ 1.1
LOC102724428A0A0B4J2F2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.91■■□□□ 1.1
LOC102724428A0A0B4J2F2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LOC102724428A0A0B4J2F2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
LOC102724428A0A0B4J2F2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.91■■□□□ 1.1
LOC102724428A0A0B4J2F2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LOC102724428A0A0B4J2F2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC21.91■■□□□ 1.1
LOC102724428A0A0B4J2F2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LOC102724428A0A0B4J2F2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC21.91■■□□□ 1.1
LOC102724428A0A0B4J2F2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC21.91■■□□□ 1.1
LOC102724428A0A0B4J2F2 GAPDHP21-201ENST00000450301 1010 ntBASIC21.91■■□□□ 1.1
LOC102724428A0A0B4J2F2 AC005412.3-201ENST00000580309 715 ntBASIC21.91■■□□□ 1.1
LOC102724428A0A0B4J2F2 AL158211.3-201ENST00000607385 239 ntBASIC21.91■■□□□ 1.1
LOC102724428A0A0B4J2F2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LOC102724428A0A0B4J2F2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.91■■□□□ 1.1
LOC102724428A0A0B4J2F2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.91■■□□□ 1.1
LOC102724428A0A0B4J2F2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LOC102724428A0A0B4J2F2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.91■■□□□ 1.1
LOC102724428A0A0B4J2F2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
LOC102724428A0A0B4J2F2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.91■■□□□ 1.1
LOC102724428A0A0B4J2F2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LOC102724428A0A0B4J2F2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 SPDYE7P-202ENST00000420373 878 ntBASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 IGHV3-42-201ENST00000520410 361 ntBASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
LOC102724428A0A0B4J2F2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
LOC102724428A0A0B4J2F2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.89■■□□□ 1.1
LOC102724428A0A0B4J2F2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LOC102724428A0A0B4J2F2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
LOC102724428A0A0B4J2F2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.89■■□□□ 1.1
LOC102724428A0A0B4J2F2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LOC102724428A0A0B4J2F2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LOC102724428A0A0B4J2F2 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
LOC102724428A0A0B4J2F2 GK-202ENST00000378941 458 ntTSL 3 BASIC21.89■■□□□ 1.09
LOC102724428A0A0B4J2F2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC21.89■■□□□ 1.09
LOC102724428A0A0B4J2F2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.89■■□□□ 1.09
LOC102724428A0A0B4J2F2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms