Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 RN7SL606P-201ENST00000472779 293 ntBASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 PTK2-216ENST00000519881 863 ntTSL 3 BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 CROCCP2-202ENST00000412962 2773 ntBASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 TSSC2-201ENST00000450217 709 ntBASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV1A0A0A0MS02 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
TRGV1A0A0A0MS02 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC12.65□□□□□ -0.39
TRGV1A0A0A0MS02 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC12.65□□□□□ -0.39
TRGV1A0A0A0MS02 AC010460.3-201ENST00000511359 1579 ntBASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 BOC-212ENST00000485230 2173 ntTSL 2 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 AC097374.2-201ENST00000618617 1306 ntBASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms