Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 IER3-202ENST00000376377 1350 ntBASIC19.86■□□□□ 0.77
CLIC4Q9Y696 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 DRAXINP1-201ENST00000437611 948 ntBASIC19.86■□□□□ 0.77
CLIC4Q9Y696 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 TOB2P1-201ENST00000469761 992 ntBASIC19.86■□□□□ 0.77
CLIC4Q9Y696 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 AD001527.2-201ENST00000622994 785 ntBASIC19.86■□□□□ 0.77
CLIC4Q9Y696 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 AL135999.2-201ENST00000622438 1686 ntBASIC19.86■□□□□ 0.77
CLIC4Q9Y696 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 FLJ38576-201ENST00000623820 2459 ntBASIC19.86■□□□□ 0.77
CLIC4Q9Y696 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 VENTXP7-201ENST00000475503 772 ntBASIC19.85■□□□□ 0.77
CLIC4Q9Y696 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 BNIP3P18-201ENST00000593976 575 ntBASIC19.85■□□□□ 0.77
CLIC4Q9Y696 AL590326.2-201ENST00000625139 305 ntBASIC19.85■□□□□ 0.77
CLIC4Q9Y696 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLIC4Q9Y696 AC092068.3-201ENST00000587894 2016 ntBASIC19.85■□□□□ 0.77
CLIC4Q9Y696 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 AC009336.1-201ENST00000608941 1553 ntBASIC19.84■□□□□ 0.77
CLIC4Q9Y696 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 MIR3180-1-201ENST00000580374 94 ntBASIC19.84■□□□□ 0.77
CLIC4Q9Y696 MIR3180-3-201ENST00000584616 94 ntBASIC19.84■□□□□ 0.77
CLIC4Q9Y696 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.84■□□□□ 0.77
CLIC4Q9Y696 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms