Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 AC023274.1-201ENST00000418278 595 ntBASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 AC027796.2-201ENST00000575326 344 ntBASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 AC010460.3-201ENST00000511359 1579 ntBASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 AC135776.1-201ENST00000319817 2481 ntBASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 AC002310.6-201ENST00000624451 1377 ntBASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 SLC25A6P5-201ENST00000435663 894 ntBASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGA9Q9Y5G4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 AC022898.2-201ENST00000616822 1312 ntBASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 AC005829.1-201ENST00000570002 483 ntBASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 AC073592.5-201ENST00000624854 528 ntBASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGA9Q9Y5G4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.27■□□□□ 0.19
PCDHGA9Q9Y5G4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDHGA9Q9Y5G4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA9Q9Y5G4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA9Q9Y5G4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA9Q9Y5G4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDHGA9Q9Y5G4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA9Q9Y5G4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 KRT8P47-201ENST00000604727 1398 ntBASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms