Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 AL671883.3-201ENST00000603274 991 ntBASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 REXO1L6P-202ENST00000619970 1078 ntBASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 AC117500.6-201ENST00000624871 588 ntBASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RPH3AQ9Y2J0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 SAPCD2P3-201ENST00000455031 850 ntBASIC16■□□□□ 0.15
RPH3AQ9Y2J0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 BMF-207ENST00000559701 630 ntTSL 3 BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 AP001269.4-201ENST00000609611 512 ntBASIC16■□□□□ 0.15
RPH3AQ9Y2J0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
RPH3AQ9Y2J0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 AC079781.3-201ENST00000449110 356 ntBASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 AC122714.2-201ENST00000502787 707 ntBASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 AF238378.1-201ENST00000526806 358 ntBASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPH3AQ9Y2J0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms