Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 MYCLP1-201ENST00000372451 1075 ntBASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 PPP6R2P1-201ENST00000450880 1275 ntBASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 MIR6080-201ENST00000617359 66 ntBASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 BX276092.7-203ENST00000637198 1536 ntBASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZC3H4Q9UPT8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZC3H4Q9UPT8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.91■□□□□ 0.94
ZC3H4Q9UPT8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZC3H4Q9UPT8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZC3H4Q9UPT8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZC3H4Q9UPT8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ZC3H4Q9UPT8 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZC3H4Q9UPT8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZC3H4Q9UPT8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.91■□□□□ 0.94
ZC3H4Q9UPT8 AC002558.1-201ENST00000488906 803 ntBASIC20.91■□□□□ 0.94
ZC3H4Q9UPT8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.91■□□□□ 0.94
ZC3H4Q9UPT8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZC3H4Q9UPT8 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZC3H4Q9UPT8 ESPNP-201ENST00000270691 2015 ntBASIC20.91■□□□□ 0.94
ZC3H4Q9UPT8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.91■□□□□ 0.94
ZC3H4Q9UPT8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZC3H4Q9UPT8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.91■□□□□ 0.94
ZC3H4Q9UPT8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZC3H4Q9UPT8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ZC3H4Q9UPT8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZC3H4Q9UPT8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZC3H4Q9UPT8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
ZC3H4Q9UPT8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
ZC3H4Q9UPT8 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZC3H4Q9UPT8 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.89■□□□□ 0.93
ZC3H4Q9UPT8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.89■□□□□ 0.93
ZC3H4Q9UPT8 SLC25A6P2-201ENST00000497974 877 ntBASIC20.89■□□□□ 0.93
ZC3H4Q9UPT8 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZC3H4Q9UPT8 AC004233.3-201ENST00000607794 1269 ntBASIC20.89■□□□□ 0.93
ZC3H4Q9UPT8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC20.89■□□□□ 0.93
ZC3H4Q9UPT8 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms