Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.7■□□□□ 0.74
CPA4Q9UI42 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPA4Q9UI42 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPA4Q9UI42 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPA4Q9UI42 REXO1L9P-201ENST00000604264 2108 ntBASIC19.7■□□□□ 0.74
CPA4Q9UI42 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPA4Q9UI42 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPA4Q9UI42 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPA4Q9UI42 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.69■□□□□ 0.74
CPA4Q9UI42 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CPA4Q9UI42 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPA4Q9UI42 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
CPA4Q9UI42 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CPA4Q9UI42 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CPA4Q9UI42 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPA4Q9UI42 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPA4Q9UI42 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CPA4Q9UI42 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
CPA4Q9UI42 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.69■□□□□ 0.74
CPA4Q9UI42 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.69■□□□□ 0.74
CPA4Q9UI42 SPDYE14P-201ENST00000442619 822 ntBASIC19.69■□□□□ 0.74
CPA4Q9UI42 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.69■□□□□ 0.74
CPA4Q9UI42 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CPA4Q9UI42 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.69■□□□□ 0.74
CPA4Q9UI42 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.69■□□□□ 0.74
CPA4Q9UI42 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CPA4Q9UI42 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPA4Q9UI42 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CPA4Q9UI42 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CPA4Q9UI42 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPA4Q9UI42 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
CPA4Q9UI42 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
CPA4Q9UI42 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.68■□□□□ 0.74
CPA4Q9UI42 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPA4Q9UI42 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPA4Q9UI42 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.68■□□□□ 0.74
CPA4Q9UI42 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPA4Q9UI42 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPA4Q9UI42 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CPA4Q9UI42 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPA4Q9UI42 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPA4Q9UI42 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPA4Q9UI42 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPA4Q9UI42 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.68■□□□□ 0.74
CPA4Q9UI42 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.68■□□□□ 0.74
CPA4Q9UI42 LINC01225-203ENST00000563550 1244 ntBASIC19.68■□□□□ 0.74
CPA4Q9UI42 MIR4515-201ENST00000584082 81 ntBASIC19.68■□□□□ 0.74
CPA4Q9UI42 AL008721.1-201ENST00000609964 604 ntBASIC19.68■□□□□ 0.74
CPA4Q9UI42 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPA4Q9UI42 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPA4Q9UI42 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPA4Q9UI42 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.68■□□□□ 0.74
CPA4Q9UI42 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPA4Q9UI42 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.68■□□□□ 0.74
CPA4Q9UI42 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.68■□□□□ 0.74
CPA4Q9UI42 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPA4Q9UI42 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPA4Q9UI42 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPA4Q9UI42 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPA4Q9UI42 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPA4Q9UI42 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPA4Q9UI42 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPA4Q9UI42 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPA4Q9UI42 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPA4Q9UI42 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPA4Q9UI42 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CPA4Q9UI42 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CPA4Q9UI42 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPA4Q9UI42 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.66■□□□□ 0.74
CPA4Q9UI42 HMGA1P7-201ENST00000406908 502 ntBASIC19.66■□□□□ 0.74
CPA4Q9UI42 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.66■□□□□ 0.74
CPA4Q9UI42 MEIS3P1-201ENST00000495167 958 ntBASIC19.66■□□□□ 0.74
CPA4Q9UI42 AC097493.3-201ENST00000509725 367 ntBASIC19.66■□□□□ 0.74
CPA4Q9UI42 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.66■□□□□ 0.74
CPA4Q9UI42 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.66■□□□□ 0.74
CPA4Q9UI42 AL161645.1-201ENST00000622716 1255 ntBASIC19.66■□□□□ 0.74
CPA4Q9UI42 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPA4Q9UI42 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPA4Q9UI42 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms