Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 AC020916.1-201ENST00000587762 1774 ntBASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 AL135999.2-201ENST00000622438 1686 ntBASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DNMT3BQ9UBC3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DNMT3BQ9UBC3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
DNMT3BQ9UBC3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
DNMT3BQ9UBC3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
DNMT3BQ9UBC3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DNMT3BQ9UBC3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
DNMT3BQ9UBC3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DNMT3BQ9UBC3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
DNMT3BQ9UBC3 REXO1L11P-201ENST00000620964 1927 ntBASIC18.08■□□□□ 0.49
DNMT3BQ9UBC3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
DNMT3BQ9UBC3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.08■□□□□ 0.49
DNMT3BQ9UBC3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.08■□□□□ 0.49
DNMT3BQ9UBC3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.08■□□□□ 0.49
DNMT3BQ9UBC3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 ACTG1P14-201ENST00000446382 1122 ntBASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DNMT3BQ9UBC3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 FAM185BP-201ENST00000443595 716 ntBASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 AC092902.6-201ENST00000641783 218 ntBASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 AC046185.3-201ENST00000623228 1824 ntBASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.07■□□□□ 0.48
DNMT3BQ9UBC3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.06■□□□□ 0.48
DNMT3BQ9UBC3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DNMT3BQ9UBC3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DNMT3BQ9UBC3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.06■□□□□ 0.48
DNMT3BQ9UBC3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
DNMT3BQ9UBC3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DNMT3BQ9UBC3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DNMT3BQ9UBC3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.06■□□□□ 0.48
DNMT3BQ9UBC3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
DNMT3BQ9UBC3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
DNMT3BQ9UBC3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DNMT3BQ9UBC3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.06■□□□□ 0.48
DNMT3BQ9UBC3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.06■□□□□ 0.48
DNMT3BQ9UBC3 SLC25A6P5-201ENST00000435663 894 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms