Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 AL390961.4-201ENST00000623958 2535 ntBASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 AC004817.3-201ENST00000602957 2129 ntBASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 AC005104.2-201ENST00000427818 678 ntBASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 SLC25A6P5-201ENST00000435663 894 ntBASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 SIGLEC30P-201ENST00000455569 941 ntBASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 AC139887.3-201ENST00000568585 713 ntBASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 STK25P1-201ENST00000585406 838 ntBASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 AL049840.3-201ENST00000602669 611 ntBASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 AC120114.3-201ENST00000611923 658 ntBASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 AC107918.4-202ENST00000641623 219 ntBASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 HLA-J-201ENST00000462773 1622 ntBASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF304Q9HCX3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 IL9RP2-201ENST00000423948 1312 ntBASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 MIR7706-201ENST00000613747 67 ntBASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF304Q9HCX3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms