Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CBX8Q9HC52 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CBX8Q9HC52 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.46■□□□□ 0.71
CBX8Q9HC52 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CBX8Q9HC52 AL391807.1-203ENST00000604392 2365 ntBASIC19.46■□□□□ 0.71
CBX8Q9HC52 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.45■□□□□ 0.7
CBX8Q9HC52 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 AC011270.2-201ENST00000624293 2550 ntBASIC19.45■□□□□ 0.7
CBX8Q9HC52 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.45■□□□□ 0.7
CBX8Q9HC52 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.45■□□□□ 0.7
CBX8Q9HC52 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.45■□□□□ 0.7
CBX8Q9HC52 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.45■□□□□ 0.7
CBX8Q9HC52 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CBX8Q9HC52 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.45■□□□□ 0.7
CBX8Q9HC52 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.45■□□□□ 0.7
CBX8Q9HC52 AC096633.1-201ENST00000422446 749 ntBASIC19.45■□□□□ 0.7
CBX8Q9HC52 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.45■□□□□ 0.7
CBX8Q9HC52 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CBX8Q9HC52 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CBX8Q9HC52 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CBX8Q9HC52 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.45■□□□□ 0.7
CBX8Q9HC52 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.45■□□□□ 0.7
CBX8Q9HC52 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.45■□□□□ 0.7
CBX8Q9HC52 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CBX8Q9HC52 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CBX8Q9HC52 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CBX8Q9HC52 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.45■□□□□ 0.7
CBX8Q9HC52 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX8Q9HC52 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CBX8Q9HC52 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.44■□□□□ 0.7
CBX8Q9HC52 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CBX8Q9HC52 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.44■□□□□ 0.7
CBX8Q9HC52 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CBX8Q9HC52 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CBX8Q9HC52 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.44■□□□□ 0.7
CBX8Q9HC52 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CBX8Q9HC52 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CBX8Q9HC52 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 HMGA1P5-201ENST00000412453 271 ntBASIC19.44■□□□□ 0.7
CBX8Q9HC52 ECEL1P3-201ENST00000427961 737 ntBASIC19.44■□□□□ 0.7
CBX8Q9HC52 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.44■□□□□ 0.7
CBX8Q9HC52 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.44■□□□□ 0.7
CBX8Q9HC52 AC124947.2-201ENST00000547118 1133 ntBASIC19.44■□□□□ 0.7
CBX8Q9HC52 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.44■□□□□ 0.7
CBX8Q9HC52 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.44■□□□□ 0.7
CBX8Q9HC52 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.44■□□□□ 0.7
CBX8Q9HC52 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CBX8Q9HC52 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CBX8Q9HC52 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CBX8Q9HC52 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX8Q9HC52 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX8Q9HC52 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX8Q9HC52 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.43■□□□□ 0.7
CBX8Q9HC52 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.43■□□□□ 0.7
CBX8Q9HC52 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.43■□□□□ 0.7
CBX8Q9HC52 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.43■□□□□ 0.7
CBX8Q9HC52 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX8Q9HC52 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms