Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 AC060834.1-201ENST00000443027 2032 ntBASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 AC112907.2-201ENST00000448639 330 ntBASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
POLR2J3Q9H1A7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 AGGF1P2-201ENST00000426656 2106 ntBASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 UBALD1-205ENST00000590891 2641 ntBASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 HYMAI.1-201ENST00000620949 238 ntBASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms