Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 AC010507.1-201ENST00000633895 436 ntBASIC17.22■□□□□ 0.35
HDAC8Q9BY41 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HDAC8Q9BY41 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC8Q9BY41 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.22■□□□□ 0.35
HDAC8Q9BY41 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC8Q9BY41 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC8Q9BY41 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HDAC8Q9BY41 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC8Q9BY41 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HDAC8Q9BY41 AC016396.2-201ENST00000562575 1417 ntBASIC17.21■□□□□ 0.35
HDAC8Q9BY41 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 GNAS-203ENST00000306120 1878 ntBASIC17.21■□□□□ 0.35
HDAC8Q9BY41 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 AC112482.1-201ENST00000492080 688 ntBASIC17.21■□□□□ 0.35
HDAC8Q9BY41 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 AC092865.6-201ENST00000642101 219 ntBASIC17.21■□□□□ 0.35
HDAC8Q9BY41 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC8Q9BY41 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.21■□□□□ 0.34
HDAC8Q9BY41 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.21■□□□□ 0.34
HDAC8Q9BY41 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 AC087163.2-201ENST00000457299 853 ntBASIC17.2■□□□□ 0.34
HDAC8Q9BY41 CXCL1P1-201ENST00000502804 216 ntBASIC17.2■□□□□ 0.34
HDAC8Q9BY41 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC8Q9BY41 AL138688.1-201ENST00000624851 1594 ntBASIC17.19■□□□□ 0.34
HDAC8Q9BY41 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 AC134043.2-201ENST00000624206 2238 ntBASIC17.19■□□□□ 0.34
HDAC8Q9BY41 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 FAM185BP-201ENST00000443595 716 ntBASIC17.19■□□□□ 0.34
HDAC8Q9BY41 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 AL513190.1-201ENST00000621254 727 ntBASIC17.19■□□□□ 0.34
HDAC8Q9BY41 AC004877.2-201ENST00000623941 599 ntBASIC17.19■□□□□ 0.34
HDAC8Q9BY41 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC8Q9BY41 AC129492.6-201ENST00000611383 1305 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms