Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 ESRRAP1-201ENST00000400596 1257 ntBASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 FLJ16779-201ENST00000612722 7638 ntBASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 KRT18P23-201ENST00000435622 1283 ntBASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 MFAP1P1-201ENST00000442257 1255 ntBASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 AC092171.3-201ENST00000610122 2651 ntBASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP4Q9BWG4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms