Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VGLL1Q99990 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VGLL1Q99990 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VGLL1Q99990 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.24□□□□□ -0.29
VGLL1Q99990 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
VGLL1Q99990 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VGLL1Q99990 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
VGLL1Q99990 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VGLL1Q99990 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VGLL1Q99990 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VGLL1Q99990 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VGLL1Q99990 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VGLL1Q99990 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.24□□□□□ -0.29
VGLL1Q99990 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
VGLL1Q99990 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
VGLL1Q99990 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VGLL1Q99990 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VGLL1Q99990 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.24□□□□□ -0.29
VGLL1Q99990 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VGLL1Q99990 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VGLL1Q99990 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VGLL1Q99990 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VGLL1Q99990 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.23□□□□□ -0.29
VGLL1Q99990 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
VGLL1Q99990 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.23□□□□□ -0.29
VGLL1Q99990 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
VGLL1Q99990 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
VGLL1Q99990 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.23□□□□□ -0.29
VGLL1Q99990 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.23□□□□□ -0.29
VGLL1Q99990 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.23□□□□□ -0.29
VGLL1Q99990 KRT18P48-201ENST00000434763 852 ntBASIC13.23□□□□□ -0.29
VGLL1Q99990 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.23□□□□□ -0.29
VGLL1Q99990 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.23□□□□□ -0.29
VGLL1Q99990 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.23□□□□□ -0.29
VGLL1Q99990 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
VGLL1Q99990 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.23□□□□□ -0.29
VGLL1Q99990 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.23□□□□□ -0.29
VGLL1Q99990 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
VGLL1Q99990 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
VGLL1Q99990 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
VGLL1Q99990 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
VGLL1Q99990 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.23□□□□□ -0.29
VGLL1Q99990 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.23□□□□□ -0.29
VGLL1Q99990 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.23□□□□□ -0.29
VGLL1Q99990 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VGLL1Q99990 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
VGLL1Q99990 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.22□□□□□ -0.29
VGLL1Q99990 AGGF1P2-201ENST00000426656 2106 ntBASIC13.22□□□□□ -0.29
VGLL1Q99990 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
VGLL1Q99990 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
VGLL1Q99990 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 KRT18P22-201ENST00000402024 1347 ntBASIC13.22□□□□□ -0.29
VGLL1Q99990 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
VGLL1Q99990 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.22□□□□□ -0.29
VGLL1Q99990 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
VGLL1Q99990 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.22□□□□□ -0.29
VGLL1Q99990 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
VGLL1Q99990 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms