Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC22.85■■□□□ 1.25
ABCA3Q99758 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ABCA3Q99758 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ABCA3Q99758 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ABCA3Q99758 AL353732.1-201ENST00000569618 1459 ntBASIC22.85■■□□□ 1.25
ABCA3Q99758 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC22.85■■□□□ 1.25
ABCA3Q99758 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC22.85■■□□□ 1.25
ABCA3Q99758 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ABCA3Q99758 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC22.85■■□□□ 1.25
ABCA3Q99758 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
ABCA3Q99758 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC22.85■■□□□ 1.25
ABCA3Q99758 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC22.85■■□□□ 1.25
ABCA3Q99758 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC22.85■■□□□ 1.25
ABCA3Q99758 AC027369.6-201ENST00000525520 931 ntBASIC22.85■■□□□ 1.25
ABCA3Q99758 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
ABCA3Q99758 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC22.85■■□□□ 1.25
ABCA3Q99758 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
ABCA3Q99758 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC22.85■■□□□ 1.25
ABCA3Q99758 AC004233.3-201ENST00000607794 1269 ntBASIC22.85■■□□□ 1.25
ABCA3Q99758 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC22.85■■□□□ 1.25
ABCA3Q99758 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
ABCA3Q99758 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
ABCA3Q99758 LINC00304-203ENST00000565008 1864 ntBASIC22.84■■□□□ 1.25
ABCA3Q99758 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
ABCA3Q99758 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ABCA3Q99758 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.84■■□□□ 1.25
ABCA3Q99758 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ABCA3Q99758 KRT18P55-202ENST00000578578 1546 ntBASIC22.84■■□□□ 1.25
ABCA3Q99758 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ABCA3Q99758 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ABCA3Q99758 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC22.84■■□□□ 1.25
ABCA3Q99758 AL080243.2-201ENST00000418783 582 ntBASIC22.84■■□□□ 1.25
ABCA3Q99758 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
ABCA3Q99758 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC22.84■■□□□ 1.25
ABCA3Q99758 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC22.84■■□□□ 1.25
ABCA3Q99758 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC22.84■■□□□ 1.25
ABCA3Q99758 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ABCA3Q99758 ACA64.2-201ENST00000459014 129 ntBASIC22.84■■□□□ 1.25
ABCA3Q99758 GIMAP3P-201ENST00000495150 836 ntBASIC22.84■■□□□ 1.25
ABCA3Q99758 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC22.84■■□□□ 1.25
ABCA3Q99758 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
ABCA3Q99758 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC22.84■■□□□ 1.25
ABCA3Q99758 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
ABCA3Q99758 AL139327.4-201ENST00000612362 153 ntBASIC22.84■■□□□ 1.25
ABCA3Q99758 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC22.84■■□□□ 1.25
ABCA3Q99758 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC22.84■■□□□ 1.25
ABCA3Q99758 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
ABCA3Q99758 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ABCA3Q99758 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ABCA3Q99758 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ABCA3Q99758 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC22.84■■□□□ 1.25
ABCA3Q99758 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ABCA3Q99758 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC22.83■■□□□ 1.25
ABCA3Q99758 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
ABCA3Q99758 AL512638.1-201ENST00000457493 794 ntBASIC22.83■■□□□ 1.25
ABCA3Q99758 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC22.83■■□□□ 1.25
ABCA3Q99758 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC22.83■■□□□ 1.25
ABCA3Q99758 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
ABCA3Q99758 COQ4-205ENST00000609948 956 ntTSL 2 BASIC22.83■■□□□ 1.25
ABCA3Q99758 TEX28P1-201ENST00000613479 1221 ntBASIC22.83■■□□□ 1.25
ABCA3Q99758 TEX28P2-201ENST00000617764 1221 ntBASIC22.83■■□□□ 1.25
ABCA3Q99758 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
ABCA3Q99758 HLA-DQB1-201ENST00000374943 1656 ntBASIC22.83■■□□□ 1.25
ABCA3Q99758 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.24
ABCA3Q99758 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
ABCA3Q99758 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
ABCA3Q99758 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
ABCA3Q99758 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ABCA3Q99758 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ABCA3Q99758 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC22.82■■□□□ 1.24
ABCA3Q99758 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC22.82■■□□□ 1.24
ABCA3Q99758 REEP4-207ENST00000523293 913 ntTSL 3 BASIC22.82■■□□□ 1.24
ABCA3Q99758 AC105233.2-201ENST00000523697 349 ntBASIC22.82■■□□□ 1.24
ABCA3Q99758 AF228730.5-201ENST00000530288 346 ntBASIC22.82■■□□□ 1.24
ABCA3Q99758 API5-211ENST00000534695 560 ntTSL 5 BASIC22.82■■□□□ 1.24
ABCA3Q99758 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC22.82■■□□□ 1.24
ABCA3Q99758 NKG7-205ENST00000600427 520 ntTSL 3 BASIC22.82■■□□□ 1.24
ABCA3Q99758 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.82■■□□□ 1.24
ABCA3Q99758 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ABCA3Q99758 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
ABCA3Q99758 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ABCA3Q99758 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC22.82■■□□□ 1.24
ABCA3Q99758 MIR346-201ENST00000362234 95 ntBASIC22.82■■□□□ 1.24
ABCA3Q99758 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC22.82■■□□□ 1.24
ABCA3Q99758 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC22.82■■□□□ 1.24
ABCA3Q99758 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC22.82■■□□□ 1.24
ABCA3Q99758 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
ABCA3Q99758 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
ABCA3Q99758 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC22.82■■□□□ 1.24
ABCA3Q99758 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.82■■□□□ 1.24
ABCA3Q99758 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
ABCA3Q99758 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.81■■□□□ 1.24
ABCA3Q99758 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
ABCA3Q99758 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ABCA3Q99758 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
ABCA3Q99758 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ABCA3Q99758 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
ABCA3Q99758 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
ABCA3Q99758 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC22.81■■□□□ 1.24
ABCA3Q99758 SLC25A1P3-201ENST00000395415 828 ntBASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms