Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 AC138028.4-201ENST00000564984 1845 ntBASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 AC004877.2-201ENST00000623941 599 ntBASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 RFPL4AP1-201ENST00000530883 850 ntBASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 KRT19P2-202ENST00000557173 1012 ntBASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SYNGAP1Q96PV0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 CEND1P1-201ENST00000451006 455 ntBASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 CYMP-203ENST00000474680 1263 ntBASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 AC005332.8-201ENST00000622750 2735 ntBASIC19.72■□□□□ 0.75
SYNGAP1Q96PV0 BCAR1-209ENST00000546196 1340 ntBASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms